RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 STARD8Q92502 1023 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 AGAP2Q99490 1192 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 CCT7Q99832 543 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 THUMPD3Q9BV44 507 aaKnown RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 DPY30Q9C005 99 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 KATNBL1Q9H079 304 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 MFSD1Q9H3U5 465 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 C11orf49Q9H6J7 331 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 CCSER2Q9H7U1 834 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 COG4Q9H9E3 785 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 PARVBQ9HBI1 364 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 PNPOQ9NVS9 261 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 MKS1Q9NXB0 559 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 ARL15Q9NXU5 204 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 IL1RAPL1Q9NZN1 696 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 ZMYND8Q9ULU4 1186 aaPredicted RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 MAFFQ9ULX9 164 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 MAPRE3Q9UPY8 281 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 ZNF711Q9Y462 761 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 BACE2Q9Y5Z0 518 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 COL4A5P29400 1685 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 PAPPA2Q9BXP8 1791 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 DPPA5A6NC42 116 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 TYROBPO43914 113 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 ADAMTS4O75173 837 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 PSMG1O95456 288 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 OTCP00480 354 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 ESR1P03372 595 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 C8AP07357 584 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 SNRPB2P08579 225 aaKnown RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 SLC2A4P14672 509 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 EPB42P16452 691 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 MZF1P28698 734 aaPredicted RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 PRDX6P30041 224 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 MAGEA6P43360 314 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 TAS2R39P59534 338 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 PITX1P78337 314 aaPredicted RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 SLC10A7Q0GE19 358 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 SLC10A2Q12908 348 aaPredicted RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 ZBTB17Q13105 803 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 CAMK2GQ13555 558 aaPredicted RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 GPRIN3Q6ZVF9 776 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 OTOP2Q7RTS6 562 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 GPRIN1Q7Z2K8 1008 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 ALYREFQ86V81 257 aaKnown RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 CIR1Q86X95 450 aaPredicted RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 FAM13CQ8NE31 585 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 ZNF296Q8WUU4 475 aaPredicted RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 PEX13Q92968 403 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 FAM162AQ96A26 154 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 REPS1Q96D71 796 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 LINGO1Q96FE5 620 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 IGSF21Q96ID5 467 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 B3GALT6Q96L58 329 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 CDRT15Q96T59 188 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 PAAF1Q9BRP4 392 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 GATA5Q9BWX5 397 aaPredicted RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 KLHL4Q9C0H6 718 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 NMUR2Q9GZQ4 415 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 RUBCNLQ9H714 662 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 WDR41Q9HAD4 459 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 EBF2Q9HAK2 575 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 CSNK1G1Q9HCP0 422 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 BPIFA1Q9NP55 256 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 SEMA4BQ9NPR2 832 aaPredicted RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 CCDC167Q9P0B6 97 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 DNAJB4Q9UDY4 337 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 PHF24Q9UPV7 400 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 TRAF6Q9Y4K3 522 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 INSL6Q9Y581 213 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 C1QTNF3-AMACRE9PGA6 284 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 IFRD1O00458 451 aaPredicted RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 SCAMP3O14828 347 aaKnown RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 UGT1A9O60656 530 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 KRT36O76013 467 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 BAIAP3O94812 1187 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 POP4O95707 220 aaKnown RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 MT-CO1P00395 513 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 PCSK2P16519 638 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 CTPS1P17812 591 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 DDX6P26196 483 aaKnown RBP eCLIP5.32□□□□□ -1.563e-8■□□□□ 9.5
SMNDC1-202ENST00000369603 SLC26A3P40879 764 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 SLC1A2P43004 574 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 PTGER3P43115 390 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 MAPK9P45984 424 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 NEK3P51956 506 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 USP4Q13107 963 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 PLPP4Q5VZY2 271 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 PSRC1Q6PGN9 363 aaPredicted RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 ZNF783Q6ZMS7 281 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 TTC7BQ86TV6 843 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 CUZD1Q86UP6 607 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 TRPC4APQ8TEL6 797 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 DNAJC1Q96KC8 554 aaKnown RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 PPP3R2Q96LZ3 170 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 ZNF184Q99676 751 aaPredicted RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 GPR22Q99680 433 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 RTKNQ9BST9 563 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 C12orf65Q9H3J6 166 aaKnown RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 UGT1A7Q9HAW7 530 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms