RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 ZNF840PA6NDX5 716 aa13.18□□□□□ -0.3
ECM1-202ENST00000369047 MUSKO15146 869 aa13.18□□□□□ -0.3
ECM1-202ENST00000369047 FDXRP22570 491 aa13.18□□□□□ -0.3
ECM1-202ENST00000369047 HOXD9P28356 352 aaPredicted RBP13.18□□□□□ -0.3
ECM1-202ENST00000369047 SLC6A4P31645 630 aa13.18□□□□□ -0.3
ECM1-202ENST00000369047 OXCT1P55809 520 aa13.18□□□□□ -0.3
ECM1-202ENST00000369047 NFKB2Q00653 900 aa13.18□□□□□ -0.3
ECM1-202ENST00000369047 NXNQ6DKJ4 435 aa13.18□□□□□ -0.3
ECM1-202ENST00000369047 PRSS55Q6UWB4 352 aaPredicted RBP13.18□□□□□ -0.3
ECM1-202ENST00000369047 RNF135Q8IUD6 432 aa13.18□□□□□ -0.3
ECM1-202ENST00000369047 BLOC1S5Q8TDH9 187 aa13.18□□□□□ -0.3
ECM1-202ENST00000369047 L3HYPDHQ96EM0 354 aa13.18□□□□□ -0.3
ECM1-202ENST00000369047 MOCOSQ96EN8 888 aa13.18□□□□□ -0.3
ECM1-202ENST00000369047 SGF29Q96ES7 293 aa13.18□□□□□ -0.3
ECM1-202ENST00000369047 MYEOVQ96EZ4 313 aa13.18□□□□□ -0.3
ECM1-202ENST00000369047 TCF12Q99081 682 aa13.18□□□□□ -0.3
ECM1-202ENST00000369047 DDX50Q9BQ39 737 aaKnown RBP13.18□□□□□ -0.3
ECM1-202ENST00000369047 CINPQ9BW66 212 aaPredicted RBP13.18□□□□□ -0.3
ECM1-202ENST00000369047 EFCAB1Q9HAE3 211 aa13.18□□□□□ -0.3
ECM1-202ENST00000369047 ZBTB26Q9HCK0 441 aa13.18□□□□□ -0.3
ECM1-202ENST00000369047 INTS10Q9NVR2 710 aaKnown RBP13.18□□□□□ -0.3
ECM1-202ENST00000369047 AFF4Q9UHB7 1163 aaKnown RBP13.18□□□□□ -0.3
ECM1-202ENST00000369047 POMPQ9Y244 141 aa13.18□□□□□ -0.3
ECM1-202ENST00000369047 PTPRSQ13332 1948 aa13.18□□□□□ -0.3
ECM1-202ENST00000369047 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.17□□□□□ -0.3
ECM1-202ENST00000369047 H3BNC9 293 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 GOT2P00505 430 aaKnown RBP13.17□□□□□ -0.3
ECM1-202ENST00000369047 PSMA3P25788 255 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 PPP3CCP48454 512 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 SUOXP51687 545 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 EPHB1P54762 984 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 CDKN2DP55273 166 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 ZNF177Q13360 481 aaPredicted RBP13.17□□□□□ -0.3
ECM1-202ENST00000369047 GPR153Q6NV75 609 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 ISCA2Q86U28 154 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 CFAP52Q8N1V2 620 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 FIBCD1Q8N539 461 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 SP7Q8TDD2 431 aaPredicted RBP13.17□□□□□ -0.3
ECM1-202ENST00000369047 MYRFLQ96LU7 910 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 ZNF184Q99676 751 aaPredicted RBP13.17□□□□□ -0.3
ECM1-202ENST00000369047 SHCBP1LQ9BZQ2 653 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 VCX3BQ9H321 246 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 CWH43Q9H720 699 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 MEAF6Q9HAF1 191 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 CYP4F11Q9HBI6 524 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 CATSPERZQ9NTU4 200 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 NLE1Q9NVX2 485 aaPredicted RBP13.17□□□□□ -0.3
ECM1-202ENST00000369047 TRPM5Q9NZQ8 1165 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 MARCH4Q9P2E8 410 aaPredicted RBP13.17□□□□□ -0.3
ECM1-202ENST00000369047 KCTD3Q9Y597 815 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 A0A0D9SEW6 157 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 SDHDO14521 159 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 SMIM24O75264 130 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 SP100P23497 879 aaPredicted RBP13.17□□□□□ -0.3
ECM1-202ENST00000369047 OR1D2P34982 312 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 MRPS35P82673 323 aaKnown RBP13.17□□□□□ -0.3
ECM1-202ENST00000369047 PDCD2Q16342 344 aaPredicted RBP13.17□□□□□ -0.3
ECM1-202ENST00000369047 TYSND1Q2T9J0 566 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 TPGS2Q68CL5 300 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 TRIM68Q6AZZ1 485 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 FAM117BQ6P1L5 589 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 CHSY3Q70JA7 882 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 SNX32Q86XE0 403 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 RHEBL1Q8TAI7 183 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 ANKRD49Q8WVL7 239 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 ZNF689Q96CS4 500 aaPredicted RBP13.17□□□□□ -0.3
ECM1-202ENST00000369047 CDKN2AIPNLQ96HQ2 116 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 SYTL2Q9HCH5 934 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 GTSE1Q9NYZ3 720 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 STK39Q9UEW8 545 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 ARL5AQ9Y689 179 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 WASF2Q9Y6W5 498 aa13.17□□□□□ -0.3
ECM1-202ENST00000369047 CCDC162PA2VCL2 907 aa13.16□□□□□ -0.3
ECM1-202ENST00000369047 AIM2O14862 343 aa13.16□□□□□ -0.3
ECM1-202ENST00000369047 INSIG1O15503 277 aa13.16□□□□□ -0.3
ECM1-202ENST00000369047 PMLP29590 882 aa13.16□□□□□ -0.3
ECM1-202ENST00000369047 STC1P52823 247 aa13.16□□□□□ -0.3
ECM1-202ENST00000369047 INHBCP55103 352 aa13.16□□□□□ -0.3
ECM1-202ENST00000369047 NAA20P61599 178 aa13.16□□□□□ -0.3
ECM1-202ENST00000369047 SULT2A1Q06520 285 aa13.16□□□□□ -0.3
ECM1-202ENST00000369047 KLC1Q07866 573 aa13.16□□□□□ -0.3
ECM1-202ENST00000369047 MAPRE2Q15555 327 aa13.16□□□□□ -0.3
ECM1-202ENST00000369047 TAF1AQ15573 450 aaPredicted RBP13.16□□□□□ -0.3
ECM1-202ENST00000369047 HABP4Q5JVS0 413 aaKnown RBP13.16□□□□□ -0.3
ECM1-202ENST00000369047 ADGRF1Q5T601 910 aa13.16□□□□□ -0.3
ECM1-202ENST00000369047 GPR158Q5T848 1215 aa13.16□□□□□ -0.3
ECM1-202ENST00000369047 IRGCQ6NXR0 463 aa13.16□□□□□ -0.3
ECM1-202ENST00000369047 ZNF783Q6ZMS7 281 aa13.16□□□□□ -0.3
ECM1-202ENST00000369047 CUZD1Q86UP6 607 aa13.16□□□□□ -0.3
ECM1-202ENST00000369047 TMEM173Q86WV6 379 aaPredicted RBP13.16□□□□□ -0.3
ECM1-202ENST00000369047 DENND1CQ8IV53 801 aa13.16□□□□□ -0.3
ECM1-202ENST00000369047 RNF168Q8IYW5 571 aaPredicted RBP13.16□□□□□ -0.3
ECM1-202ENST00000369047 PELI3Q8N2H9 469 aa13.16□□□□□ -0.3
ECM1-202ENST00000369047 ZNF461Q8TAF7 563 aa13.16□□□□□ -0.3
ECM1-202ENST00000369047 BCL7CQ8WUZ0 217 aaPredicted RBP13.16□□□□□ -0.3
ECM1-202ENST00000369047 TIFAQ96CG3 184 aa13.16□□□□□ -0.3
ECM1-202ENST00000369047 DNAJC1Q96KC8 554 aaKnown RBP13.16□□□□□ -0.3
ECM1-202ENST00000369047 TTC1Q99614 292 aa13.16□□□□□ -0.3
ECM1-202ENST00000369047 OSBPL1AQ9BXW6 950 aa13.16□□□□□ -0.3
ECM1-202ENST00000369047 PBX4Q9BYU1 374 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms