RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 TTC25Q96NG3 672 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 CDC42EP4Q9H3Q1 356 aaKnown RBP8.89□□□□□ -0.99
TPM3-213ENST00000368545 C10orf88Q9H8K7 445 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 TRPM5Q9NZQ8 1165 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 NUDT5Q9UKK9 219 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 NEU3Q9UQ49 428 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 ASB3Q9Y575 518 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 INSL5Q9Y5Q6 135 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 DENND4CQ5VZ89 1909 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 MTCL1Q9Y4B5 1905 aaKnown RBP8.89□□□□□ -0.99
TPM3-213ENST00000368545 SHROOM3Q8TF72 1996 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 SHISA3A0PJX4 238 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 WASH4PA8MWX3 477 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 E9PAM4 449 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 H3BQF6 201 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 TPP1O14773 563 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 TEX28O15482 410 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 RIPK2O43353 540 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 PI15O43692 258 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 OPHN1O60890 802 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 GSNP06396 782 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 HMGA1P17096 107 aaKnown RBP8.88□□□□□ -0.99
TPM3-213ENST00000368545 GRK2P25098 689 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 MAGEA6P43360 314 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 SEPHS1P49903 392 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 MLLT6P55198 1093 aaPredicted RBP8.88□□□□□ -0.99
TPM3-213ENST00000368545 ARL4CP56559 192 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 PPIDQ08752 370 aaKnown RBP8.88□□□□□ -0.99
TPM3-213ENST00000368545 IFFO1Q0D2I5 559 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 GALNT2Q10471 571 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 AP1B1Q10567 949 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 PDCD1Q15116 288 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 HECTD3Q5T447 861 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 RWDD4Q6NW29 188 aaKnown RBP8.88□□□□□ -0.99
TPM3-213ENST00000368545 LRRC31Q6UY01 552 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 PRR23BQ6ZRT6 265 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 ARHGEF18Q6ZSZ5 1173 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 CCDC149Q6ZUS6 474 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 LSM14AQ8ND56 463 aaKnown RBP8.88□□□□□ -0.99
TPM3-213ENST00000368545 VN1R2Q8NFZ6 395 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 JADE3Q92613 823 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 PSMG2Q969U7 264 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 Q96M66 194 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 RBM15Q96T37 977 aaKnown RBP eCLIP8.88□□□□□ -0.99
TPM3-213ENST00000368545 SIK2Q9H0K1 926 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 POMKQ9H5K3 350 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 ACSS3Q9H6R3 686 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 CCM2LQ9NUG4 571 aaPredicted RBP8.88□□□□□ -0.99
TPM3-213ENST00000368545 MFHAS1Q9Y4C4 1052 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 IRAK3Q9Y616 596 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 HS3ST4Q9Y661 456 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 SPTBN4Q9H254 2564 aa8.88□□□□□ -0.99
TPM3-213ENST00000368545 A0A0A0MRY4 1105 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 SLC12A8A0AV02 714 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 TTC4O95801 387 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 MOCS2O96007 188 aaPredicted RBP8.87□□□□□ -0.99
TPM3-213ENST00000368545 MYZAPP0CAP1 466 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 TGM1P22735 817 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 CA8P35219 290 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 FDFT1P37268 417 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 GARSP41250 739 aaKnown RBP8.87□□□□□ -0.99
TPM3-213ENST00000368545 RPS9P46781 194 aaKnown RBP8.87□□□□□ -0.99
TPM3-213ENST00000368545 TWF1Q12792 350 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 KCNAB2Q13303 367 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 KCNJ11Q14654 390 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 PABPC1LQ4VXU2 614 aaKnown RBP8.87□□□□□ -0.99
TPM3-213ENST00000368545 FDX2Q6P4F2 183 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 DENND4AQ7Z401 1863 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 MIB1Q86YT6 1006 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 LRRC49Q8IUZ0 686 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 NPWQ8N729 165 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 CCNYQ8ND76 341 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 AUTS2Q8WXX7 1259 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 EXOC4Q96A65 974 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 SPATA13Q96N96 652 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 VAT1Q99536 393 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 NACA2Q9H009 215 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 EPB41L4BQ9H329 900 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 RETREG1Q9H6L5 497 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 SFXN1Q9H9B4 322 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 EPS15L1Q9UBC2 864 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 MRPS17Q9Y2R5 130 aaKnown RBP8.87□□□□□ -0.99
TPM3-213ENST00000368545 NFS1Q9Y697 457 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 LAMA2P24043 3122 aaKnown RBP8.87□□□□□ -0.99
TPM3-213ENST00000368545 CHD9Q3L8U1 2897 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 IGLV3-10A0A075B6K4 115 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 ZNF840PA6NDX5 716 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 ABHD2P08910 425 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 CNPP09543 421 aaKnown RBP8.87□□□□□ -0.99
TPM3-213ENST00000368545 VAV1P15498 845 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 TPSB2P20231 275 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 CDK16Q00536 496 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 ZNF844Q08AG5 666 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 SLC29A2Q14542 456 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 TPSAB1Q15661 275 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 PLA2G4EQ3MJ16 856 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 MS4A13Q5J8X5 152 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 CEP85LQ5SZL2 805 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 PRR23CQ6ZRP0 262 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 PDIK1LQ8N165 341 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms