RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 FAM187AA6NFU0 413 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 DNALI1O14645 258 aaPredicted RBP13.9□□□□□ -0.18
TPM3-211ENST00000368531 WNT9AO14904 365 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 LATO43561 262 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 SUN1O94901 812 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 ZNF30P17039 623 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 CD27P26842 260 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 ETV3P41162 512 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 STC1P52823 247 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 CLDN2P57739 230 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 SESN2P58004 480 aaPredicted RBP13.9□□□□□ -0.18
TPM3-211ENST00000368531 PTPRCAPQ14761 206 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 POU6F1Q14863 301 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 CDKN3Q16667 212 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 SPDYCQ5MJ68 293 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 CERCAMQ5T4B2 595 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 C8orf74Q6P047 294 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 KDM7AQ6ZMT4 941 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 GLT6D1Q7Z4J2 308 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 ZCCHC9Q8N567 271 aaKnown RBP13.9□□□□□ -0.18
TPM3-211ENST00000368531 NOA1Q8NC60 698 aaKnown RBP13.9□□□□□ -0.18
TPM3-211ENST00000368531 EID2BQ96D98 161 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 SLC6A18Q96N87 628 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 LYSMD1Q96S90 227 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 PHOX2BQ99453 314 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 LRRC1Q9BTT6 524 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 ARRDC1-AS1Q9H2J1 176 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 ARNT2Q9HBZ2 717 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 CASS4Q9NQ75 786 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 EIF2B3Q9NR50 452 aaKnown RBP13.9□□□□□ -0.18
TPM3-211ENST00000368531 AASDHPPTQ9NRN7 309 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 TMEM74BQ9NUR3 256 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 FNDC3AQ9Y2H6 1198 aaKnown RBP13.9□□□□□ -0.18
TPM3-211ENST00000368531 KCTD3Q9Y597 815 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 ARL5AQ9Y689 179 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 SCN8AQ9UQD0 1980 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 ADAMTS9Q9P2N4 1935 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 TMEM63AO94886 807 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 PCCBP05166 539 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 GM2AP17900 193 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 TPSB2P20231 275 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 HNRNPA2B1P22626 353 aaKnown RBP13.89□□□□□ -0.19
TPM3-211ENST00000368531 IVDP26440 423 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 AKT2P31751 481 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 NBL1P41271 181 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 RPL21P46778 160 aaKnown RBP13.89□□□□□ -0.19
TPM3-211ENST00000368531 TMPRSS15P98073 1019 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 CDH17Q12864 832 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 STAT4Q14765 748 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 TPSAB1Q15661 275 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 CCDC38Q502W7 563 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 ALS2CLQ60I27 953 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 LAYNQ6UX15 382 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 TMC3Q7Z5M5 1100 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 PPIL6Q8IXY8 311 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 TTC30BQ8N4P2 665 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 MMGT1Q8N4V1 131 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 SUMF1Q8NBK3 374 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 DNASE2BQ8WZ79 361 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 NUS1Q96E22 293 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 SNF8Q96H20 258 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 COQ10AQ96MF6 247 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 SRPK1Q96SB4 655 aaKnown RBP13.89□□□□□ -0.19
TPM3-211ENST00000368531 ORAI3Q9BRQ5 295 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 C1QTNF7Q9BXJ2 289 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 SEMA4AQ9H3S1 761 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 MBNL1Q9NR56 388 aaKnown RBP13.89□□□□□ -0.19
TPM3-211ENST00000368531 PKD2L2Q9NZM6 624 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 HACD3Q9P035 362 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 TP53BP1Q12888 1972 aaPredicted RBP13.89□□□□□ -0.19
TPM3-211ENST00000368531 CUL9Q8IWT3 2517 aa13.89□□□□□ -0.19
TPM3-211ENST00000368531 C10orf142B7Z368 130 aa13.88□□□□□ -0.19
TPM3-211ENST00000368531 PRAMEF26H0Y7S4 382 aa13.88□□□□□ -0.19
TPM3-211ENST00000368531 H0Y8X5 98 aa13.88□□□□□ -0.19
TPM3-211ENST00000368531 PSMD11O00231 422 aa13.88□□□□□ -0.19
TPM3-211ENST00000368531 BCAT2O15382 392 aaPredicted RBP13.88□□□□□ -0.19
TPM3-211ENST00000368531 AVILO75366 819 aa13.88□□□□□ -0.19
TPM3-211ENST00000368531 CFIP05156 583 aa13.88□□□□□ -0.19
TPM3-211ENST00000368531 MGAT1P26572 445 aa13.88□□□□□ -0.19
TPM3-211ENST00000368531 SPINT3P49223 89 aa13.88□□□□□ -0.19
TPM3-211ENST00000368531 ITGA8P53708 1063 aa13.88□□□□□ -0.19
TPM3-211ENST00000368531 CRADDP78560 199 aa13.88□□□□□ -0.19
TPM3-211ENST00000368531 SARNPP82979 210 aaKnown RBP13.88□□□□□ -0.19
TPM3-211ENST00000368531 CDK16Q00536 496 aa13.88□□□□□ -0.19
TPM3-211ENST00000368531 NHLH1Q02575 133 aa13.88□□□□□ -0.19
TPM3-211ENST00000368531 MSLNQ13421 630 aaPredicted RBP13.88□□□□□ -0.19
TPM3-211ENST00000368531 LRRC14Q15048 493 aa13.88□□□□□ -0.19
TPM3-211ENST00000368531 IRF4Q15306 451 aa13.88□□□□□ -0.19
TPM3-211ENST00000368531 WSCD2Q2TBF2 565 aa13.88□□□□□ -0.19
TPM3-211ENST00000368531 RNASEH2BQ5TBB1 312 aaKnown RBP13.88□□□□□ -0.19
TPM3-211ENST00000368531 LAIR1Q6GTX8 287 aa13.88□□□□□ -0.19
TPM3-211ENST00000368531 TECPR1Q7Z6L1 1165 aa13.88□□□□□ -0.19
TPM3-211ENST00000368531 PCGF5Q86SE9 256 aa13.88□□□□□ -0.19
TPM3-211ENST00000368531 SYT12Q8IV01 421 aa13.88□□□□□ -0.19
TPM3-211ENST00000368531 CBARPQ8N350 705 aaPredicted RBP13.88□□□□□ -0.19
TPM3-211ENST00000368531 NAT8LQ8N9F0 302 aa13.88□□□□□ -0.19
TPM3-211ENST00000368531 TP53I13Q8NBR0 393 aaPredicted RBP13.88□□□□□ -0.19
TPM3-211ENST00000368531 LRRN4CLQ8ND94 238 aa13.88□□□□□ -0.19
TPM3-211ENST00000368531 BRSK1Q8TDC3 778 aa13.88□□□□□ -0.19
TPM3-211ENST00000368531 SCAMP4Q969E2 229 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms