RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 TERF2Q15554 542 aa10.05□□□□□ -0.8
TPM3-210ENST00000368530 CST6Q15828 149 aa10.05□□□□□ -0.8
TPM3-210ENST00000368530 TTC31Q49AM3 519 aaPredicted RBP10.05□□□□□ -0.8
TPM3-210ENST00000368530 CCDC38Q502W7 563 aa10.05□□□□□ -0.8
TPM3-210ENST00000368530 C6orf118Q5T5N4 469 aa10.05□□□□□ -0.8
TPM3-210ENST00000368530 TTC19Q6DKK2 380 aaPredicted RBP10.05□□□□□ -0.8
TPM3-210ENST00000368530 NCEH1Q6PIU2 408 aa10.05□□□□□ -0.8
TPM3-210ENST00000368530 PPP1R21Q6ZMI0 780 aa10.05□□□□□ -0.8
TPM3-210ENST00000368530 PID1Q7Z2X4 250 aa10.05□□□□□ -0.8
TPM3-210ENST00000368530 TFAP2DQ7Z6R9 452 aa10.05□□□□□ -0.8
TPM3-210ENST00000368530 TMPRSS12Q86WS5 348 aa10.05□□□□□ -0.8
TPM3-210ENST00000368530 CIR1Q86X95 450 aaPredicted RBP10.05□□□□□ -0.8
TPM3-210ENST00000368530 GATAD2AQ86YP4 633 aa10.05□□□□□ -0.8
TPM3-210ENST00000368530 IGDCC3Q8IVU1 814 aa10.05□□□□□ -0.8
TPM3-210ENST00000368530 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.05□□□□□ -0.8
TPM3-210ENST00000368530 KDM1BQ8NB78 822 aa10.05□□□□□ -0.8
TPM3-210ENST00000368530 CFAP36Q96G28 342 aa10.05□□□□□ -0.8
TPM3-210ENST00000368530 TTC25Q96NG3 672 aa10.05□□□□□ -0.8
TPM3-210ENST00000368530 SERPINB12Q96P63 405 aa10.05□□□□□ -0.8
TPM3-210ENST00000368530 ELF4Q99607 663 aaPredicted RBP10.05□□□□□ -0.8
TPM3-210ENST00000368530 TMEM109Q9BVC6 243 aa10.05□□□□□ -0.8
TPM3-210ENST00000368530 NDFIP2Q9NV92 336 aa10.05□□□□□ -0.8
TPM3-210ENST00000368530 PIH1D1Q9NWS0 290 aaKnown RBP10.05□□□□□ -0.8
TPM3-210ENST00000368530 FBXL12Q9NXK8 326 aa10.05□□□□□ -0.8
TPM3-210ENST00000368530 SLCO3A1Q9UIG8 710 aa10.05□□□□□ -0.8
TPM3-210ENST00000368530 HELZ2Q9BYK8 2649 aaKnown RBP10.05□□□□□ -0.8
TPM3-210ENST00000368530 GOLGA4Q13439 2230 aaKnown RBP10.04□□□□□ -0.8
TPM3-210ENST00000368530 EXOC1LA0A1B0GW35 172 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 TTC34A8MYJ7 566 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 FOXO6A8MYZ6 492 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 E7ESA3 106 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 POC1B-GALNT4F8VUJ3 575 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 PLK4O00444 970 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 MID1O15344 667 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 EIF3HO15372 352 aaKnown RBP eCLIP10.04□□□□□ -0.8
TPM3-210ENST00000368530 CNTN5O94779 1100 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 SSTR1P30872 391 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 FDFT1P37268 417 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 GRIA1P42261 906 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 SLC11A2P49281 568 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 PPIDQ08752 370 aaKnown RBP10.04□□□□□ -0.8
TPM3-210ENST00000368530 ZBTB17Q13105 803 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 SEMA5AQ13591 1074 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 SPARCL1Q14515 664 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 EFTUD2Q15029 972 aaKnown RBP eCLIP10.04□□□□□ -0.82e-18■■■■□ 20.8
TPM3-210ENST00000368530 ARTNQ5T4W7 220 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 LRRC31Q6UY01 552 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 KANSL1Q7Z3B3 1105 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 CAND1Q86VP6 1230 aaKnown RBP10.04□□□□□ -0.8
TPM3-210ENST00000368530 CHSY1Q86X52 802 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 MFN1Q8IWA4 741 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 ARHGAP12Q8IWW6 846 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 PALM2Q8IXS6 379 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 AGGF1Q8N302 714 aaeCLIP10.04□□□□□ -0.81e-7■□□□□ 11.2
TPM3-210ENST00000368530 ATPAF2Q8N5M1 289 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 AADATQ8N5Z0 425 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 RTL3Q8N8U3 475 aaKnown RBP10.04□□□□□ -0.8
TPM3-210ENST00000368530 ATP11CQ8NB49 1132 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 FAM131CQ96AQ9 280 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 HDAC11Q96DB2 347 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 BTN2A3PQ96KV6 586 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 AGAP3Q96P47 875 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 CCDC77Q9BR77 488 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 ACE2Q9BYF1 805 aaPredicted RBP10.04□□□□□ -0.8
TPM3-210ENST00000368530 ROPN1BQ9BZX4 212 aaPredicted RBP10.04□□□□□ -0.8
TPM3-210ENST00000368530 SLC39A8Q9C0K1 460 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 ROPN1Q9HAT0 212 aaPredicted RBP10.04□□□□□ -0.8
TPM3-210ENST00000368530 TBK1Q9UHD2 729 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 RSPH14Q9UHP6 348 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 ERVW-1Q9UQF0 538 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 PCDHGA1Q9Y5H4 931 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 COL5A1P20908 1838 aaPredicted RBP10.04□□□□□ -0.8
TPM3-210ENST00000368530 KALRNO60229 2985 aa10.04□□□□□ -0.8
TPM3-210ENST00000368530 SETXQ7Z333 2677 aaKnown RBP10.03□□□□□ -0.8
TPM3-210ENST00000368530 A0A1W2PP55 124 aa10.03□□□□□ -0.8
TPM3-210ENST00000368530 FAM47DPA6NHR8 397 aa10.03□□□□□ -0.8
TPM3-210ENST00000368530 LATO43561 262 aa10.03□□□□□ -0.8
TPM3-210ENST00000368530 TLX3O43711 291 aaPredicted RBP10.03□□□□□ -0.8
TPM3-210ENST00000368530 PIAS1O75925 651 aa10.03□□□□□ -0.8
TPM3-210ENST00000368530 JCHAINP01591 159 aa10.03□□□□□ -0.8
TPM3-210ENST00000368530 ASLP04424 464 aa10.03□□□□□ -0.8
TPM3-210ENST00000368530 IVLP07476 585 aa10.03□□□□□ -0.8
TPM3-210ENST00000368530 ABHD2P08910 425 aa10.03□□□□□ -0.8
TPM3-210ENST00000368530 TPSB2P20231 275 aa10.03□□□□□ -0.8
TPM3-210ENST00000368530 ITPKBP27987 946 aa10.03□□□□□ -0.8
TPM3-210ENST00000368530 SLC8A1P32418 973 aa10.03□□□□□ -0.8
TPM3-210ENST00000368530 HTR7P34969 479 aa10.03□□□□□ -0.8
TPM3-210ENST00000368530 MAGEA6P43360 314 aa10.03□□□□□ -0.8
TPM3-210ENST00000368530 NUMBP49757 651 aa10.03□□□□□ -0.8
TPM3-210ENST00000368530 CCR5P51681 352 aa10.03□□□□□ -0.8
TPM3-210ENST00000368530 NRG1Q02297 640 aaPredicted RBP10.03□□□□□ -0.8
TPM3-210ENST00000368530 DNAJC3Q13217 504 aa10.03□□□□□ -0.8
TPM3-210ENST00000368530 STAT4Q14765 748 aa10.03□□□□□ -0.8
TPM3-210ENST00000368530 TMED2Q15363 201 aa10.03□□□□□ -0.8
TPM3-210ENST00000368530 TPSAB1Q15661 275 aa10.03□□□□□ -0.8
TPM3-210ENST00000368530 PARP6Q2NL67 630 aa10.03□□□□□ -0.8
TPM3-210ENST00000368530 ALFQ53S48 1182 aa10.03□□□□□ -0.8
TPM3-210ENST00000368530 CCDC157Q569K6 752 aa10.03□□□□□ -0.8
TPM3-210ENST00000368530 PITRM1Q5JRX3 1037 aa10.03□□□□□ -0.8
TPM3-210ENST00000368530 NUGGCQ68CJ6 796 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms