RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 GPR27Q9NS67 375 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 DNAAF2Q9NVR5 837 aaKnown RBP15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 CDV3Q9UKY7 258 aaKnown RBP15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 DCHS1Q96JQ0 3298 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 MYLKQ15746 1914 aa15.09■□□□□ 0.01
SMPDL3A-201ENST00000368440 STK10O94804 968 aaKnown RBP15.09■□□□□ 0.01
SMPDL3A-201ENST00000368440 CLDN7O95471 211 aa15.09■□□□□ 0.01
SMPDL3A-201ENST00000368440 CER1O95813 267 aa15.09■□□□□ 0.01
SMPDL3A-201ENST00000368440 PCCBP05166 539 aa15.09■□□□□ 0.01
SMPDL3A-201ENST00000368440 ATXN1LP0C7T5 689 aaKnown RBP15.09■□□□□ 0.01
SMPDL3A-201ENST00000368440 NFKBIAP25963 317 aa15.09■□□□□ 0.01
SMPDL3A-201ENST00000368440 PFN3P60673 137 aa15.09■□□□□ 0.01
SMPDL3A-201ENST00000368440 OVGP1Q12889 678 aa15.09■□□□□ 0.01
SMPDL3A-201ENST00000368440 ARHGEF7Q14155 803 aa15.09■□□□□ 0.01
SMPDL3A-201ENST00000368440 SHBQ15464 509 aa15.09■□□□□ 0.01
SMPDL3A-201ENST00000368440 KCTD19Q17RG1 926 aaPredicted RBP15.09■□□□□ 0.01
SMPDL3A-201ENST00000368440 IL27RAQ6UWB1 636 aa15.09■□□□□ 0.01
SMPDL3A-201ENST00000368440 Q6ZVL8 140 aa15.09■□□□□ 0.01
SMPDL3A-201ENST00000368440 PRUNE1Q86TP1 453 aa15.09■□□□□ 0.01
SMPDL3A-201ENST00000368440 NDUFAF2Q8N183 169 aa15.09■□□□□ 0.01
SMPDL3A-201ENST00000368440 RASGEF1CQ8N431 466 aa15.09■□□□□ 0.01
SMPDL3A-201ENST00000368440 SKA1Q96BD8 255 aa15.09■□□□□ 0.01
SMPDL3A-201ENST00000368440 LYSMD1Q96S90 227 aa15.09■□□□□ 0.01
SMPDL3A-201ENST00000368440 OSBPL9Q96SU4 736 aa15.09■□□□□ 0.01
SMPDL3A-201ENST00000368440 C1QTNF7Q9BXJ2 289 aa15.09■□□□□ 0.01
SMPDL3A-201ENST00000368440 ADGRE3Q9BY15 652 aa15.09■□□□□ 0.01
SMPDL3A-201ENST00000368440 FRMD8P1Q9BZ68 369 aaPredicted RBP15.09■□□□□ 0.01
SMPDL3A-201ENST00000368440 GDF3Q9NR23 364 aa15.09■□□□□ 0.01
SMPDL3A-201ENST00000368440 CEP250Q9BV73 2442 aa15.08■□□□□ 0.01
SMPDL3A-201ENST00000368440 LRP4O75096 1905 aa15.08■□□□□ 0.01
SMPDL3A-201ENST00000368440 LOC285095A0A1B0GVY8 99 aa15.08■□□□□ 0.01
SMPDL3A-201ENST00000368440 SLC30A4O14863 429 aa15.08■□□□□ 0.01
SMPDL3A-201ENST00000368440 OPHN1O60890 802 aa15.08■□□□□ 0.01
SMPDL3A-201ENST00000368440 METTL18O95568 372 aa15.08■□□□□ 0.01
SMPDL3A-201ENST00000368440 NDST3O95803 873 aa15.08■□□□□ 0.01
SMPDL3A-201ENST00000368440 PTSQ03393 145 aa15.08■□□□□ 0.01
SMPDL3A-201ENST00000368440 MPP3Q13368 585 aa15.08■□□□□ 0.01
SMPDL3A-201ENST00000368440 FAXCQ5TGI0 409 aa15.08■□□□□ 0.01
SMPDL3A-201ENST00000368440 TAB3Q8N5C8 712 aaPredicted RBP15.08■□□□□ 0.01
SMPDL3A-201ENST00000368440 SLC25A41Q8N5S1 370 aa15.08■□□□□ 0.01
SMPDL3A-201ENST00000368440 GLIS1Q8NBF1 620 aa15.08■□□□□ 0.01
SMPDL3A-201ENST00000368440 RTP4Q96DX8 246 aa15.08■□□□□ 0.01
SMPDL3A-201ENST00000368440 NUS1Q96E22 293 aa15.08■□□□□ 0.01
SMPDL3A-201ENST00000368440 DTD2Q96FN9 168 aa15.08■□□□□ 0.01
SMPDL3A-201ENST00000368440 PBKQ96KB5 322 aa15.08■□□□□ 0.01
SMPDL3A-201ENST00000368440 CD84Q9UIB8 345 aa15.08■□□□□ 0.01
SMPDL3A-201ENST00000368440 SNX12Q9UMY4 172 aa15.08■□□□□ 0.01
SMPDL3A-201ENST00000368440 SPO11Q9Y5K1 396 aa15.08■□□□□ 0.01
SMPDL3A-201ENST00000368440 C1orf232A0A0U1RR37 186 aa15.08■□□□□ 0
SMPDL3A-201ENST00000368440 K7ESM1 405 aa15.08■□□□□ 0
SMPDL3A-201ENST00000368440 PSMD11O00231 422 aa15.08■□□□□ 0
SMPDL3A-201ENST00000368440 ZNF185O15231 689 aa15.08■□□□□ 0
SMPDL3A-201ENST00000368440 GCATO75600 419 aa15.08■□□□□ 0
SMPDL3A-201ENST00000368440 ETS1P14921 441 aa15.08■□□□□ 0
SMPDL3A-201ENST00000368440 RABIFP47224 123 aa15.08■□□□□ 0
SMPDL3A-201ENST00000368440 STC1P52823 247 aa15.08■□□□□ 0
SMPDL3A-201ENST00000368440 GEMP55040 296 aa15.08■□□□□ 0
SMPDL3A-201ENST00000368440 INPP5AQ14642 412 aa15.08■□□□□ 0
SMPDL3A-201ENST00000368440 CCNG2Q16589 344 aa15.08■□□□□ 0
SMPDL3A-201ENST00000368440 SIRPB2Q5JXA9 342 aa15.08■□□□□ 0
SMPDL3A-201ENST00000368440 ARHGEF18Q6ZSZ5 1173 aa15.08■□□□□ 0
SMPDL3A-201ENST00000368440 LYSMD3Q7Z3D4 306 aa15.08■□□□□ 0
SMPDL3A-201ENST00000368440 TECPR1Q7Z6L1 1165 aa15.08■□□□□ 0
SMPDL3A-201ENST00000368440 PRELID2Q8N945 189 aa15.08■□□□□ 0
SMPDL3A-201ENST00000368440 EID2BQ96D98 161 aa15.08■□□□□ 0
SMPDL3A-201ENST00000368440 ELF4Q99607 663 aaPredicted RBP15.08■□□□□ 0
SMPDL3A-201ENST00000368440 FICDQ9BVA6 458 aa15.08■□□□□ 0
SMPDL3A-201ENST00000368440 TM7SF3Q9NS93 570 aa15.08■□□□□ 0
SMPDL3A-201ENST00000368440 SHOC2Q9UQ13 582 aa15.08■□□□□ 0
SMPDL3A-201ENST00000368440 ZNF148Q9UQR1 794 aa15.08■□□□□ 0
SMPDL3A-201ENST00000368440 OR1A2Q9Y585 309 aa15.08■□□□□ 0
SMPDL3A-201ENST00000368440 ASCC3Q8N3C0 2202 aaKnown RBP15.07■□□□□ 0
SMPDL3A-201ENST00000368440 A0A1B0GTQ1 180 aa15.07■□□□□ 0
SMPDL3A-201ENST00000368440 TM4SF5O14894 197 aa15.07■□□□□ 0
SMPDL3A-201ENST00000368440 MAGEC1O60732 1142 aa15.07■□□□□ 0
SMPDL3A-201ENST00000368440 AGTP01019 485 aa15.07■□□□□ 0
SMPDL3A-201ENST00000368440 CD59P13987 128 aa15.07■□□□□ 0
SMPDL3A-201ENST00000368440 ZNF30P17039 623 aa15.07■□□□□ 0
SMPDL3A-201ENST00000368440 KCNJ1P48048 391 aa15.07■□□□□ 0
SMPDL3A-201ENST00000368440 PDE1CQ14123 709 aaPredicted RBP15.07■□□□□ 0
SMPDL3A-201ENST00000368440 FZD2Q14332 565 aa15.07■□□□□ 0
SMPDL3A-201ENST00000368440 ZNF542PQ5EBM4 170 aa15.07■□□□□ 0
SMPDL3A-201ENST00000368440 MAIP1Q8WWC4 291 aa15.07■□□□□ 0
SMPDL3A-201ENST00000368440 APOL2Q9BQE5 337 aa15.07■□□□□ 0
SMPDL3A-201ENST00000368440 DLL3Q9NYJ7 618 aa15.07■□□□□ 0
SMPDL3A-201ENST00000368440 PNMA8BQ9ULN7 279 aaPredicted RBP15.07■□□□□ 0
SMPDL3A-201ENST00000368440 ZNF711Q9Y462 761 aa15.07■□□□□ 0
SMPDL3A-201ENST00000368440 UQCRHLA0A096LP55 91 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 AURKAO14965 403 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 ZNF189O75820 626 aaPredicted RBP15.06■□□□□ 0
SMPDL3A-201ENST00000368440 ANXA9O76027 345 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 SLC4A1P02730 911 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 ITGAVP06756 1048 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 UQCRHP07919 91 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 ADRA1AP35348 466 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 MTM1Q13496 603 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 SPARCL1Q14515 664 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 SLC1A5Q15758 541 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 ESRP1Q6NXG1 681 aaKnown RBP15.06■□□□□ 0
SMPDL3A-201ENST00000368440 KLHDC8BQ8IXV7 354 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms