RNA–Protein interactions for RNA: ENST00000368301.6

LMNA-207, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-207ENST00000368301 GPR150Q8NGU9 434 aa18.13■□□□□ 0.49
LMNA-207ENST00000368301 CDK5RAP1Q96SZ6 601 aaKnown RBP18.13■□□□□ 0.49
LMNA-207ENST00000368301 CXorf56Q9H5V9 222 aa18.13■□□□□ 0.49
LMNA-207ENST00000368301 ZBTB26Q9HCK0 441 aa18.13■□□□□ 0.49
LMNA-207ENST00000368301 BACE2Q9Y5Z0 518 aa18.13■□□□□ 0.49
LMNA-207ENST00000368301 PPP6CO00743 305 aa18.12■□□□□ 0.49
LMNA-207ENST00000368301 CLDN11O75508 207 aa18.12■□□□□ 0.49
LMNA-207ENST00000368301 GNRH1P01148 92 aa18.12■□□□□ 0.49
LMNA-207ENST00000368301 CXCL10P02778 98 aa18.12■□□□□ 0.49
LMNA-207ENST00000368301 DPP6P42658 865 aa18.12■□□□□ 0.49
LMNA-207ENST00000368301 RNF219Q5W0B1 726 aaPredicted RBP18.12■□□□□ 0.49
LMNA-207ENST00000368301 CXorf57Q6NSI4 855 aaKnown RBP18.12■□□□□ 0.49
LMNA-207ENST00000368301 MRNIPQ6NTE8 343 aa18.12■□□□□ 0.49
LMNA-207ENST00000368301 AUTS2Q8WXX7 1259 aa18.12■□□□□ 0.49
LMNA-207ENST00000368301 NDE1Q9NXR1 346 aa18.12■□□□□ 0.49
LMNA-207ENST00000368301 TRPM5Q9NZQ8 1165 aa18.12■□□□□ 0.49
LMNA-207ENST00000368301 AFF4Q9UHB7 1163 aaKnown RBP18.12■□□□□ 0.49
LMNA-207ENST00000368301 YIPF1Q9Y548 306 aa18.12■□□□□ 0.49
LMNA-207ENST00000368301 TRIM17Q9Y577 477 aa18.12■□□□□ 0.49
LMNA-207ENST00000368301 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.12■□□□□ 0.49
LMNA-207ENST00000368301 STC1P52823 247 aa18.12■□□□□ 0.49
LMNA-207ENST00000368301 CDH13P55290 713 aa18.12■□□□□ 0.49
LMNA-207ENST00000368301 ZNF177Q13360 481 aaPredicted RBP18.12■□□□□ 0.49
LMNA-207ENST00000368301 FAM117BQ6P1L5 589 aa18.12■□□□□ 0.49
LMNA-207ENST00000368301 GK5Q6ZS86 529 aa18.12■□□□□ 0.49
LMNA-207ENST00000368301 LMNTD2Q8IXW0 634 aa18.12■□□□□ 0.49
LMNA-207ENST00000368301 REM2Q8IYK8 340 aaPredicted RBP18.12■□□□□ 0.49
LMNA-207ENST00000368301 PDZD8Q8NEN9 1154 aa18.12■□□□□ 0.49
LMNA-207ENST00000368301 LPCAT1Q8NF37 534 aa18.12■□□□□ 0.49
LMNA-207ENST00000368301 RP9Q8TA86 221 aaKnown RBP18.12■□□□□ 0.49
LMNA-207ENST00000368301 HMGCLL1Q8TB92 370 aa18.12■□□□□ 0.49
LMNA-207ENST00000368301 SLC22A12Q96S37 553 aa18.12■□□□□ 0.49
LMNA-207ENST00000368301 SCUBE2Q9NQ36 999 aa18.12■□□□□ 0.49
LMNA-207ENST00000368301 IKZF3Q9UKT9 509 aa18.12■□□□□ 0.49
LMNA-207ENST00000368301 MED16Q9Y2X0 877 aa18.12■□□□□ 0.49
LMNA-207ENST00000368301 UBA6A0AVT1 1052 aaPredicted RBP18.11■□□□□ 0.49
LMNA-207ENST00000368301 STX16-NPEPL1H3BU86 382 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 MAP3K7O43318 606 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 FKTNO75072 461 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 SUPT7LO94864 414 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 SIX3O95343 332 aaPredicted RBP18.11■□□□□ 0.49
LMNA-207ENST00000368301 CD160O95971 181 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 F11P03951 625 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 HDCP19113 662 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 PMLP29590 882 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 ARF5P84085 180 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 BTG3Q14201 252 aaPredicted RBP18.11■□□□□ 0.49
LMNA-207ENST00000368301 SETMARQ53H47 684 aaPredicted RBP18.11■□□□□ 0.49
LMNA-207ENST00000368301 UNC50Q53HI1 259 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 CMPK2Q5EBM0 449 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 ZNF678Q5SXM1 525 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 CYHR1Q6ZMK1 362 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 GLT6D1Q7Z4J2 308 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 PELI3Q8N2H9 469 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 BBS5Q8N3I7 341 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 KYQ8NBH2 561 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 ZNF461Q8TAF7 563 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 UCMAQ8WVF2 138 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 PLD4Q96BZ4 506 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 CCDC126Q96EE4 140 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 NPAS2Q99743 824 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 AARSD1Q9BTE6 412 aaKnown RBP18.11■□□□□ 0.49
LMNA-207ENST00000368301 TDRD1Q9BXT4 1180 aaKnown RBP18.11■□□□□ 0.49
LMNA-207ENST00000368301 NLE1Q9NVX2 485 aaPredicted RBP18.11■□□□□ 0.49
LMNA-207ENST00000368301 FNDC3AQ9Y2H6 1198 aaKnown RBP18.11■□□□□ 0.49
LMNA-207ENST00000368301 COL4A6Q14031 1691 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 TANC1Q9C0D5 1861 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 ANKRD36A6QL64 1941 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 ILVBLA1L0T0 632 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 UBXN8O00124 270 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 CFLARO15519 480 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 FKBP6O75344 327 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 BMP1P13497 986 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 ZNF37AP17032 561 aaPredicted RBP18.11■□□□□ 0.49
LMNA-207ENST00000368301 IMPDH1P20839 514 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 FMO4P31512 558 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 PKNOX1P55347 436 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 ADGRF1Q5T601 910 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 KLHDC10Q6PID8 442 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 RNF148Q8N7C7 305 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 TTC16Q8NEE8 873 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 USP13Q92995 863 aaPredicted RBP18.11■□□□□ 0.49
LMNA-207ENST00000368301 BHMTQ93088 406 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 VWCEQ96DN2 955 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 KLF16Q9BXK1 252 aaPredicted RBP18.11■□□□□ 0.49
LMNA-207ENST00000368301 MUC3BQ9H195 1237 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 GALPQ9UBC7 116 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 FAM50BQ9Y247 325 aa18.11■□□□□ 0.49
LMNA-207ENST00000368301 ANAPC1Q9H1A4 1944 aa18.1■□□□□ 0.49
LMNA-207ENST00000368301 TCAF2A6NFQ2 919 aa18.1■□□□□ 0.49
LMNA-207ENST00000368301 TRPC5OSA6NMA1 111 aa18.1■□□□□ 0.49
LMNA-207ENST00000368301 ABLIM3O94929 683 aa18.1■□□□□ 0.49
LMNA-207ENST00000368301 ENO3P13929 434 aaPredicted RBP18.1■□□□□ 0.49
LMNA-207ENST00000368301 MZF1P28698 734 aaPredicted RBP18.1■□□□□ 0.49
LMNA-207ENST00000368301 THOP1P52888 689 aa18.1■□□□□ 0.49
LMNA-207ENST00000368301 MTA1Q13330 715 aa18.1■□□□□ 0.49
LMNA-207ENST00000368301 BLMHQ13867 455 aa18.1■□□□□ 0.49
LMNA-207ENST00000368301 TYSND1Q2T9J0 566 aa18.1■□□□□ 0.49
LMNA-207ENST00000368301 FBXO48Q5FWF7 155 aa18.1■□□□□ 0.49
LMNA-207ENST00000368301 CEP70Q8NHQ1 597 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms