RNA–Protein interactions for RNA: ENST00000368300.8

LMNA-206, Transcript of lamin A/C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNA, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-206ENST00000368300 BATF3Q9NR55 127 aa12.33□□□□□ -0.44
LMNA-206ENST00000368300 PLK2Q9NYY3 685 aa12.33□□□□□ -0.44
LMNA-206ENST00000368300 NCKIPSDQ9NZQ3 722 aa12.33□□□□□ -0.44
LMNA-206ENST00000368300 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.33□□□□□ -0.44
LMNA-206ENST00000368300 SORCS3Q9UPU3 1222 aa12.33□□□□□ -0.44
LMNA-206ENST00000368300 FAM50BQ9Y247 325 aa12.33□□□□□ -0.44
LMNA-206ENST00000368300 BACE2Q9Y5Z0 518 aa12.33□□□□□ -0.44
LMNA-206ENST00000368300 MIA3Q5JRA6 1907 aa12.33□□□□□ -0.44
LMNA-206ENST00000368300 KIAA0100Q14667 2235 aaKnown RBP12.33□□□□□ -0.44
LMNA-206ENST00000368300 DPPA5A6NC42 116 aa12.33□□□□□ -0.44
LMNA-206ENST00000368300 LRRC14BA6NHZ5 514 aa12.33□□□□□ -0.44
LMNA-206ENST00000368300 MAGEC1O60732 1142 aa12.33□□□□□ -0.44
LMNA-206ENST00000368300 H2AFYO75367 372 aaKnown RBP12.33□□□□□ -0.44
LMNA-206ENST00000368300 NDST3O95803 873 aa12.33□□□□□ -0.44
LMNA-206ENST00000368300 FGF1P05230 155 aa12.33□□□□□ -0.44
LMNA-206ENST00000368300 HLA-DPA1P20036 260 aa12.33□□□□□ -0.44
LMNA-206ENST00000368300 ATP5F1P24539 256 aaPredicted RBP12.33□□□□□ -0.44
LMNA-206ENST00000368300 RAP1GDS1P52306 607 aa12.33□□□□□ -0.44
LMNA-206ENST00000368300 CDH13P55290 713 aa12.33□□□□□ -0.44
LMNA-206ENST00000368300 SMAD3P84022 425 aaKnown RBP12.33□□□□□ -0.44
LMNA-206ENST00000368300 TSNAXIP1Q2TAA8 658 aa12.33□□□□□ -0.44
LMNA-206ENST00000368300 OR6K2Q8NGY2 324 aa12.33□□□□□ -0.44
LMNA-206ENST00000368300 OR4L1Q8NH43 312 aa12.33□□□□□ -0.44
LMNA-206ENST00000368300 FAM81AQ8TBF8 368 aa12.33□□□□□ -0.44
LMNA-206ENST00000368300 CDKN2AIPNLQ96HQ2 116 aa12.33□□□□□ -0.44
LMNA-206ENST00000368300 PSKH2Q96QS6 385 aa12.33□□□□□ -0.44
LMNA-206ENST00000368300 TRIB3Q96RU7 358 aa12.33□□□□□ -0.44
LMNA-206ENST00000368300 MGME1Q9BQP7 344 aa12.33□□□□□ -0.44
LMNA-206ENST00000368300 ZNF334Q9HCZ1 680 aaPredicted RBP12.33□□□□□ -0.44
LMNA-206ENST00000368300 SCUBE2Q9NQ36 999 aa12.33□□□□□ -0.44
LMNA-206ENST00000368300 COMMD8Q9NX08 183 aa12.33□□□□□ -0.44
LMNA-206ENST00000368300 MYO7AQ13402 2215 aa12.33□□□□□ -0.44
LMNA-206ENST00000368300 KDELR3O43731 214 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 ABLIM3O94929 683 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 EFEMP2O95967 443 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 TIAL1Q01085 375 aaKnown RBP eCLIP12.32□□□□□ -0.44
LMNA-206ENST00000368300 ARHGEF6Q15052 776 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 DNAL1Q4LDG9 190 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 TCHHL1Q5QJ38 904 aaPredicted RBP12.32□□□□□ -0.44
LMNA-206ENST00000368300 SNX32Q86XE0 403 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 UBXN10Q96LJ8 280 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 TTC1Q99614 292 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 TMEM39AQ9NV64 488 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 OGDHLQ9ULD0 1010 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 PPP6CO00743 305 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 INSIG1O15503 277 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 TBL1XO60907 577 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 CLDN11O75508 207 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 RPP40O75818 363 aaKnown RBP12.32□□□□□ -0.44
LMNA-206ENST00000368300 CIB2O75838 187 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 SOD2P04179 222 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 ATP5BP06576 529 aaKnown RBP12.32□□□□□ -0.44
LMNA-206ENST00000368300 ACRP10323 421 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 HDCP19113 662 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 ITGAXP20702 1163 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 ITGB8P26012 769 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 FMO4P31512 558 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 MSX2P35548 267 aaPredicted RBP12.32□□□□□ -0.44
LMNA-206ENST00000368300 POLD2P49005 469 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 ATXN7L2Q5T6C5 722 aaPredicted RBP12.32□□□□□ -0.44
LMNA-206ENST00000368300 CXorf57Q6NSI4 855 aaKnown RBP12.32□□□□□ -0.44
LMNA-206ENST00000368300 GLT6D1Q7Z4J2 308 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 TMEM150AQ86TG1 271 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 ISCA2Q86U28 154 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 HPS6Q86YV9 775 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 BBS5Q8N3I7 341 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 MAB21L3Q8N8X9 362 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 WFDC5Q8TCV5 224 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 CMTM5Q96DZ9 223 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 KLF16Q9BXK1 252 aaPredicted RBP12.32□□□□□ -0.44
LMNA-206ENST00000368300 H0Y626 953 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 K7ERQ8 282 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 IPO13O94829 963 aaKnown RBP12.32□□□□□ -0.44
LMNA-206ENST00000368300 BAG2O95816 211 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 GJA1P17302 382 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 PIK3R1P27986 724 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 MNX1P50219 401 aaPredicted RBP12.32□□□□□ -0.44
LMNA-206ENST00000368300 ARF5P84085 180 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 TNK2Q07912 1038 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 ASPHQ12797 758 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 BTG3Q14201 252 aaPredicted RBP12.32□□□□□ -0.44
LMNA-206ENST00000368300 C5orf22Q49AR2 442 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 CLEC6AQ6EIG7 209 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 KLC3Q6P597 504 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 RNF168Q8IYW5 571 aaPredicted RBP12.32□□□□□ -0.44
LMNA-206ENST00000368300 PDZD8Q8NEN9 1154 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 CATSPERZQ9NTU4 200 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 CDYLQ9Y232 598 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 FCF1Q9Y324 198 aaKnown RBP12.32□□□□□ -0.44
LMNA-206ENST00000368300 RAI2Q9Y5P3 530 aa12.32□□□□□ -0.44
LMNA-206ENST00000368300 SUPT7LO94864 414 aa12.31□□□□□ -0.44
LMNA-206ENST00000368300 SIX3O95343 332 aaPredicted RBP12.31□□□□□ -0.44
LMNA-206ENST00000368300 CD160O95971 181 aa12.31□□□□□ -0.44
LMNA-206ENST00000368300 MYL4P12829 197 aa12.31□□□□□ -0.44
LMNA-206ENST00000368300 PFKPQ01813 784 aa12.31□□□□□ -0.44
LMNA-206ENST00000368300 PPP1R3AQ16821 1122 aa12.31□□□□□ -0.44
LMNA-206ENST00000368300 ANKRD33Q7Z3H0 272 aa12.31□□□□□ -0.44
LMNA-206ENST00000368300 TSPAN17Q96FV3 270 aa12.31□□□□□ -0.44
LMNA-206ENST00000368300 CDK5RAP1Q96SZ6 601 aaKnown RBP12.31□□□□□ -0.44
LMNA-206ENST00000368300 TM6SF2Q9BZW4 377 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms