RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 CD302Q8IX05 232 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 FBXO18Q8NFZ0 1043 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 GPR150Q8NGU9 434 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 SCFD2Q8WU76 684 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 SLC13A3Q8WWT9 602 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 STAMQ92783 540 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 SGK3Q96BR1 496 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 LRRC39Q96DD0 335 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 PIWIL1Q96J94 861 aaKnown RBP3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 REEP2Q9BRK0 252 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 THAP2Q9H0W7 228 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 ABHD16BQ9H3Z7 469 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 GORASP2Q9H8Y8 452 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 BRF2Q9HAW0 419 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 ABCB8Q9NUT2 735 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 PLA2G3Q9NZ20 509 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 TMEFF2Q9UIK5 374 aaPredicted RBP3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 LEF1Q9UJU2 399 aaPredicted RBP3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 ITGA11Q9UKX5 1188 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 TNFSF13BQ9Y275 285 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 TBC1D30Q9Y2I9 924 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 RPH3AQ9Y2J0 694 aaPredicted RBP3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 NR2E1Q9Y466 385 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 NEUROG3Q9Y4Z2 214 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 SNX9Q9Y5X1 595 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 CLCA3PQ9Y6N3 262 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 COMMD3-BMI1R4GMX3 469 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 CACNA1DQ01668 2161 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 TRAV6A0A075B6T7 132 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 SYCE3A1L190 88 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 PMS2P1A4D2B8 440 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 CLCA1A8K7I4 914 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 E2F3O00716 465 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 TP73O15350 636 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 TTI1O43156 1089 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 ZC3H11AO75152 810 aaKnown RBP eCLIP3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 TNFRSF6BO95407 300 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 MMP1P03956 469 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 TUBB4AP04350 444 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 PCCAP05165 728 aaPredicted RBP3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 PRKCBP05771 671 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 ZFYP08048 801 aaPredicted RBP3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 RPSAP08865 295 aaKnown RBP3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 FAM86B2P0C5J1 330 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 OSMP13725 252 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 FDPSP14324 419 aaKnown RBP3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 TYRP14679 529 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 RXRAP19793 462 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 SAT1P21673 171 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 ITPKBP27987 946 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 AOAHP28039 575 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 ALDH4A1P30038 563 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 GCH1P30793 250 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 SLC7A1P30825 629 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 RPL9P32969 192 aaKnown RBP3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 RFC2P35250 354 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 PAFAH1B1P43034 410 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 HAAOP46952 286 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 SCNN1GP51170 649 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 HSD17B4P51659 736 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 CCNHP51946 323 aaPredicted RBP3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 POLGP54098 1239 aaPredicted RBP3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 MLLT6P55198 1093 aaPredicted RBP3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 CARD18P57730 90 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 RPP38P78345 283 aaKnown RBP3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 MRPS9P82933 396 aaKnown RBP3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 CDK17Q00537 523 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 PRKCEQ02156 737 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 AIMP2Q13155 320 aaKnown RBP3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 ADAM9Q13443 819 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 MTX1Q13505 466 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 CUL1Q13616 776 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 PTK6Q13882 451 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 CBFBQ13951 182 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 PDK1Q15118 436 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 ZNF174Q15697 407 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 NTRK2Q16620 822 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 TWISTNBQ3B726 338 aaPredicted RBP3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 FBXO43Q4G163 708 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 CCDC157Q569K6 752 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 ZNF628Q5EBL2 1059 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 NHSL2Q5HYW2 709 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 EMC10Q5UCC4 262 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 MBNL2Q5VZF2 373 aaKnown RBP3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 MBLAC2Q68D91 279 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 FAM111BQ6SJ93 734 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 HHIPL2Q6UWX4 724 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 SLC36A4Q6YBV0 504 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 H1FNTQ75WM6 255 aaPredicted RBP3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 TAOK1Q7L7X3 1001 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 KCNK18Q7Z418 384 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 TADA2BQ86TJ2 420 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 RTN4RL1Q86UN2 441 aaPredicted RBP3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 CABP7Q86V35 215 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 IRF2BP1Q8IU81 584 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 CCDC103Q8IW40 242 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 ADGRG2Q8IZP9 1017 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 LZTR1Q8N653 840 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 OR13C2Q8NGS9 318 aa3.57□□□□□ -1.84
ECHDC1-205ENST00000368295 GANCQ8TET4 914 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms