RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 MAXP61244 160 aa14.3□□□□□ -0.12
CD48-201ENST00000368045 SERINC3Q13530 473 aa14.3□□□□□ -0.12
CD48-201ENST00000368045 IKBKEQ14164 716 aa14.3□□□□□ -0.12
CD48-201ENST00000368045 LPIN1Q14693 890 aa14.3□□□□□ -0.12
CD48-201ENST00000368045 MAP7D1Q3KQU3 841 aa14.3□□□□□ -0.12
CD48-201ENST00000368045 COQ5Q5HYK3 327 aa14.3□□□□□ -0.12
CD48-201ENST00000368045 C6orf10Q5SRN2 563 aa14.3□□□□□ -0.12
CD48-201ENST00000368045 B3GNT6Q6ZMB0 384 aa14.3□□□□□ -0.12
CD48-201ENST00000368045 DHFR2Q86XF0 187 aa14.3□□□□□ -0.12
CD48-201ENST00000368045 ANKFN1Q8N957 763 aa14.3□□□□□ -0.12
CD48-201ENST00000368045 TRPV1Q8NER1 839 aa14.3□□□□□ -0.12
CD48-201ENST00000368045 PSMG2Q969U7 264 aa14.3□□□□□ -0.12
CD48-201ENST00000368045 KLHL5Q96PQ7 755 aa14.3□□□□□ -0.12
CD48-201ENST00000368045 SYT17Q9BSW7 474 aa14.3□□□□□ -0.12
CD48-201ENST00000368045 RBM38Q9H0Z9 239 aaKnown RBP14.3□□□□□ -0.12
CD48-201ENST00000368045 PCDHAC1Q9H158 963 aa14.3□□□□□ -0.12
CD48-201ENST00000368045 TFB2MQ9H5Q4 396 aaKnown RBP14.3□□□□□ -0.12
CD48-201ENST00000368045 ABI2Q9NYB9 513 aaPredicted RBP14.3□□□□□ -0.12
CD48-201ENST00000368045 NUDT5Q9UKK9 219 aa14.3□□□□□ -0.12
CD48-201ENST00000368045 SQORQ9Y6N5 450 aa14.3□□□□□ -0.12
CD48-201ENST00000368045 MYLKQ15746 1914 aa14.3□□□□□ -0.12
CD48-201ENST00000368045 ANKRD33BA6NCL7 494 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 MOXD2PA6NHM9 499 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 MANSC4A6NHS7 340 aaPredicted RBP14.29□□□□□ -0.12
CD48-201ENST00000368045 VILLO15195 856 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 RAMP2O60895 175 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 TRPA1O75762 1119 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 CELF2O95319 508 aaKnown RBP14.29□□□□□ -0.12
CD48-201ENST00000368045 FOXM1Q08050 763 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 NADK2Q4G0N4 442 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 ALFQ53S48 1182 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 RBM44Q6ZP01 1051 aaKnown RBP14.29□□□□□ -0.12
CD48-201ENST00000368045 HERC6Q8IVU3 1022 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 MIER2Q8N344 545 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 PACRGLQ8N7B6 248 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 OR2T34Q8NGX1 318 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 OR2T3Q8NH03 318 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 TSPEARQ8WU66 669 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 LRTOMTQ8WZ04 291 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.29□□□□□ -0.12
CD48-201ENST00000368045 SLCO4A1Q96BD0 722 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 PTERQ96BW5 349 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 ZNF599Q96NL3 588 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 GPATCH1Q9BRR8 931 aaKnown RBP14.29□□□□□ -0.12
CD48-201ENST00000368045 POLR1EQ9GZS1 481 aaKnown RBP14.29□□□□□ -0.12
CD48-201ENST00000368045 INTS10Q9NVR2 710 aaKnown RBP14.29□□□□□ -0.12
CD48-201ENST00000368045 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.29□□□□□ -0.12
CD48-201ENST00000368045 FAM92AA1XBS5 289 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 AQP12BA6NM10 295 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 FAM155AB1AL88 458 aaPredicted RBP14.29□□□□□ -0.12
CD48-201ENST00000368045 AZIN1O14977 448 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 CD3EAPO15446 510 aaKnown RBP14.29□□□□□ -0.12
CD48-201ENST00000368045 CNTN5O94779 1100 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 MATN4O95460 622 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 BMP2P12643 396 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 CYBAP13498 195 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 YWHAQP27348 245 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 KCNC1P48547 511 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 MRPL19P49406 292 aaKnown RBP14.29□□□□□ -0.12
CD48-201ENST00000368045 RALGDSQ12967 914 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 BNIP2Q12982 314 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 IHHQ14623 411 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 POLD3Q15054 466 aaPredicted RBP14.29□□□□□ -0.12
CD48-201ENST00000368045 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.29□□□□□ -0.12
CD48-201ENST00000368045 TMEM259Q4ZIN3 620 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 FAM26DQ5JW98 314 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 KANK2Q63ZY3 851 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 CLEC6AQ6EIG7 209 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 ZNF549Q6P9A3 640 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 RPS27LQ71UM5 84 aaKnown RBP14.29□□□□□ -0.12
CD48-201ENST00000368045 CARM1Q86X55 608 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 FUNDC1Q8IVP5 155 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 AQP12AQ8IXF9 295 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 PGBD5Q8N414 524 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 MINDY1Q8N5J2 469 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 PTGR2Q8N8N7 351 aaPredicted RBP14.29□□□□□ -0.12
CD48-201ENST00000368045 BRSK1Q8TDC3 778 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 PRPF18Q99633 342 aaKnown RBP14.29□□□□□ -0.12
CD48-201ENST00000368045 AARSD1Q9BTE6 412 aaKnown RBP14.29□□□□□ -0.12
CD48-201ENST00000368045 COQ10BQ9H8M1 238 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 AKTIPQ9H8T0 292 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 POLR3BQ9NW08 1133 aaPredicted RBP14.29□□□□□ -0.12
CD48-201ENST00000368045 GID8Q9NWU2 228 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 GMIPQ9P107 970 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 ABCD2Q9UBJ2 740 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 APPL1Q9UKG1 709 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 PCDHB5Q9Y5E4 795 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 TLL2Q9Y6L7 1015 aa14.29□□□□□ -0.12
CD48-201ENST00000368045 PDLIM1O00151 329 aa14.28□□□□□ -0.12
CD48-201ENST00000368045 PRAMEF11O60813 436 aa14.28□□□□□ -0.12
CD48-201ENST00000368045 CDK14O94921 469 aa14.28□□□□□ -0.12
CD48-201ENST00000368045 OR6B1O95007 311 aa14.28□□□□□ -0.12
CD48-201ENST00000368045 GOT2P00505 430 aaKnown RBP14.28□□□□□ -0.12
CD48-201ENST00000368045 ALDOCP09972 364 aaKnown RBP14.28□□□□□ -0.12
CD48-201ENST00000368045 HSD17B1P14061 328 aa14.28□□□□□ -0.12
CD48-201ENST00000368045 ETS2P15036 469 aa14.28□□□□□ -0.12
CD48-201ENST00000368045 ZNF37AP17032 561 aaPredicted RBP14.28□□□□□ -0.12
CD48-201ENST00000368045 SLC7A2P52569 658 aa14.28□□□□□ -0.12
CD48-201ENST00000368045 TYSND1Q2T9J0 566 aa14.28□□□□□ -0.12
CD48-201ENST00000368045 FBXL22Q6P050 247 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms