RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 PTDSS1P48651 473 aaKnown RBP14.04□□□□□ -0.16
USF1-202ENST00000368020 RAB30Q15771 203 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 PABPC1LQ4VXU2 614 aaKnown RBP14.04□□□□□ -0.16
USF1-202ENST00000368020 VWA5B1Q5TIE3 1220 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 C16orf89Q6UX73 402 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 ITIH5Q86UX2 942 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 TDHQ8IZJ6 230 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 CFAP52Q8N1V2 620 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 CCNYL1Q8N7R7 359 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 KLHL23Q8NBE8 558 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 TXNDC5Q8NBS9 432 aaKnown RBP14.04□□□□□ -0.16
USF1-202ENST00000368020 PPFIBP2Q8ND30 876 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 SERPINI1Q99574 410 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 NDNQ99608 321 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 OLFM1Q99784 485 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 CLSTN3Q9BQT9 956 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 KLF16Q9BXK1 252 aaPredicted RBP14.04□□□□□ -0.16
USF1-202ENST00000368020 CYP4F11Q9HBI6 524 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 SYTL2Q9HCH5 934 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 HACD3Q9P035 362 aa14.04□□□□□ -0.16
USF1-202ENST00000368020 PRPF19Q9UMS4 504 aaKnown RBP14.04□□□□□ -0.16
USF1-202ENST00000368020 MUSKO15146 869 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 ADAM12O43184 909 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 GOT2P00505 430 aaKnown RBP14.03□□□□□ -0.16
USF1-202ENST00000368020 URODP06132 367 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 CA3P07451 260 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 CR2P20023 1033 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 CTNNB1P35222 781 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 STC1P52823 247 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 EPHB3P54753 998 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 ERVK-21P61565 698 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 BTKQ06187 659 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 RAB33AQ14088 237 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 ACCSLQ4AC99 568 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 INO80DQ53TQ3 878 aaPredicted RBP14.03□□□□□ -0.16
USF1-202ENST00000368020 TLDC1Q6P9B6 456 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 RAB44Q7Z6P3 723 aaPredicted RBP14.03□□□□□ -0.16
USF1-202ENST00000368020 LSMEM2Q8N112 164 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 OR7D4Q8NG98 312 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 CEP70Q8NHQ1 597 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 RHEBL1Q8TAI7 183 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 L3HYPDHQ96EM0 354 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 MAELQ96JY0 434 aaKnown RBP14.03□□□□□ -0.16
USF1-202ENST00000368020 TBATAQ96M53 351 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 PRICKLE1Q96MT3 831 aaPredicted RBP14.03□□□□□ -0.16
USF1-202ENST00000368020 SPON2Q9BUD6 331 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 CCDC68Q9H2F9 335 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 PRO3102Q9H379 93 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.03□□□□□ -0.16
USF1-202ENST00000368020 SLC7A8Q9UHI5 535 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 BCAP29Q9UHQ4 241 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 ZDHHC2Q9UIJ5 367 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 MSRAQ9UJ68 235 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 AGO1Q9UL18 857 aaKnown RBP14.03□□□□□ -0.16
USF1-202ENST00000368020 IRAK3Q9Y616 596 aa14.03□□□□□ -0.16
USF1-202ENST00000368020 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.03□□□□□ -0.16
USF1-202ENST00000368020 LAMA2P24043 3122 aaKnown RBP14.03□□□□□ -0.16
USF1-202ENST00000368020 A8MT66 165 aa14.02□□□□□ -0.16
USF1-202ENST00000368020 H0Y3Z8 333 aa14.02□□□□□ -0.16
USF1-202ENST00000368020 PRRG1O14668 218 aa14.02□□□□□ -0.16
USF1-202ENST00000368020 AURKAO14965 403 aa14.02□□□□□ -0.16
USF1-202ENST00000368020 GRID2O43424 1007 aa14.02□□□□□ -0.16
USF1-202ENST00000368020 CTSAP10619 480 aa14.02□□□□□ -0.16
USF1-202ENST00000368020 IMPDH1P20839 514 aa14.02□□□□□ -0.16
USF1-202ENST00000368020 ARSDP51689 593 aa14.02□□□□□ -0.16
USF1-202ENST00000368020 ZNF140P52738 457 aaPredicted RBP14.02□□□□□ -0.16
USF1-202ENST00000368020 RPS24P62847 133 aaKnown RBP14.02□□□□□ -0.16
USF1-202ENST00000368020 IRX1P78414 480 aaPredicted RBP14.02□□□□□ -0.16
USF1-202ENST00000368020 IHHQ14623 411 aa14.02□□□□□ -0.16
USF1-202ENST00000368020 TAF11Q15544 211 aa14.02□□□□□ -0.16
USF1-202ENST00000368020 MAPRE2Q15555 327 aa14.02□□□□□ -0.16
USF1-202ENST00000368020 LSM12Q3MHD2 195 aaKnown RBP14.02□□□□□ -0.16
USF1-202ENST00000368020 AARS2Q5JTZ9 985 aaKnown RBP14.02□□□□□ -0.16
USF1-202ENST00000368020 RIPOR1Q6ZS17 1223 aa14.02□□□□□ -0.16
USF1-202ENST00000368020 FRMD7Q6ZUT3 714 aa14.02□□□□□ -0.16
USF1-202ENST00000368020 GLT6D1Q7Z4J2 308 aa14.02□□□□□ -0.16
USF1-202ENST00000368020 KDM1BQ8NB78 822 aa14.02□□□□□ -0.16
USF1-202ENST00000368020 HJURPQ8NCD3 748 aaPredicted RBP14.02□□□□□ -0.16
USF1-202ENST00000368020 MAPK15Q8TD08 544 aa14.02□□□□□ -0.16
USF1-202ENST00000368020 WDR60Q8WVS4 1066 aa14.02□□□□□ -0.16
USF1-202ENST00000368020 RMDN1Q96DB5 314 aa14.02□□□□□ -0.16
USF1-202ENST00000368020 MYEOVQ96EZ4 313 aa14.02□□□□□ -0.16
USF1-202ENST00000368020 DNAJC1Q96KC8 554 aaKnown RBP14.02□□□□□ -0.16
USF1-202ENST00000368020 C19orf43Q9BQ61 176 aa14.02□□□□□ -0.16
USF1-202ENST00000368020 TDRD1Q9BXT4 1180 aaKnown RBP14.02□□□□□ -0.16
USF1-202ENST00000368020 MUC3BQ9H195 1237 aa14.02□□□□□ -0.16
USF1-202ENST00000368020 MRPL17Q9NRX2 175 aaKnown RBP14.02□□□□□ -0.16
USF1-202ENST00000368020 TMCO1Q9UM00 188 aa14.02□□□□□ -0.16
USF1-202ENST00000368020 ARL5AQ9Y689 179 aa14.02□□□□□ -0.16
USF1-202ENST00000368020 COMMD10Q9Y6G5 202 aa14.02□□□□□ -0.16
USF1-202ENST00000368020 MYO7AQ13402 2215 aa14.02□□□□□ -0.17
USF1-202ENST00000368020 A0A088AWK7 358 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 CCDC162PA2VCL2 907 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 TNRC18O15417 2968 aaPredicted RBP14.01□□□□□ -0.17
USF1-202ENST00000368020 LILRB3O75022 631 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 SEC24AO95486 1093 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 MYOGP15173 224 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 ACADSP16219 412 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 CD9P21926 228 aa14.01□□□□□ -0.17
USF1-202ENST00000368020 SCNN1BP51168 640 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms