RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 E9PBE3 544 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 AIM2O14862 343 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 GRID2O43424 1007 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 MFSD11O43934 449 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 KLHL41O60662 606 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 TRMUO75648 421 aaKnown RBP11.57□□□□□ -0.56
USF1-201ENST00000368019 GRAP2O75791 330 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 GABBR2O75899 941 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 KRT34O76011 436 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 B3GAT3O94766 335 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 OR6B1O95007 311 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 PGM3O95394 542 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 C7P10643 843 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 ETS2P15036 469 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 ZNF26P17031 533 aaPredicted RBP11.57□□□□□ -0.56
USF1-201ENST00000368019 XRCC1P18887 633 aaPredicted RBP11.57□□□□□ -0.56
USF1-201ENST00000368019 PSMB4P28070 264 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 TKTP29401 623 aaKnown RBP11.57□□□□□ -0.56
USF1-201ENST00000368019 RANBP1P43487 201 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 RGS7P49802 495 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 ATP4BP51164 291 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 SESN2P58004 480 aaPredicted RBP11.57□□□□□ -0.56
USF1-201ENST00000368019 DNAJB13P59910 316 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 OSTNP61366 133 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 USP46P62068 366 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 PRKCQQ04759 706 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 SOX4Q06945 474 aaPredicted RBP11.57□□□□□ -0.56
USF1-201ENST00000368019 PPIDQ08752 370 aaKnown RBP11.57□□□□□ -0.56
USF1-201ENST00000368019 GALNT1Q10472 559 aaPredicted RBP11.57□□□□□ -0.56
USF1-201ENST00000368019 USP4Q13107 963 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 STX5Q13190 355 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 ORC1Q13415 861 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 ART3Q13508 389 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 CEACAM7Q14002 265 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 SLC25A52Q3SY17 297 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 SLC44A4Q53GD3 710 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 GLRA4Q5JXX5 417 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 VWA5B1Q5TIE3 1220 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 NAPRTQ6XQN6 538 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 STRA8Q7Z7C7 330 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 CARM1Q86X55 608 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 CNTN4Q8IWV2 1026 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 ZNF567Q8N184 647 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 PLD6Q8N2A8 252 aaKnown RBP11.57□□□□□ -0.56
USF1-201ENST00000368019 AFAP1L2Q8N4X5 818 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 ZFP28Q8NHY6 868 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 ADAMTS16Q8TE57 1224 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 NT5C3BQ969T7 300 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 ZNF669Q96BR6 464 aaPredicted RBP11.57□□□□□ -0.56
USF1-201ENST00000368019 VPS39Q96JC1 886 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 UROC1Q96N76 676 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 PPP1R2P1Q96PQ5 205 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 OR52B2Q96RD2 323 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 CDRT15Q96T59 188 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 EFHD1Q9BUP0 239 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 ACE2Q9BYF1 805 aaPredicted RBP11.57□□□□□ -0.56
USF1-201ENST00000368019 OSBPL6Q9BZF3 934 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 GOLGA2P5Q9HBQ8 144 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 VPS45Q9NRW7 570 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 GALNT8Q9NY28 637 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 RSL24D1Q9UHA3 163 aaKnown RBP11.57□□□□□ -0.56
USF1-201ENST00000368019 VANGL2Q9ULK5 521 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 STAP1Q9ULZ2 295 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 CEPT1Q9Y6K0 416 aa11.57□□□□□ -0.56
USF1-201ENST00000368019 ARHGEF37A1IGU5 675 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.56□□□□□ -0.56
USF1-201ENST00000368019 TARM1B6A8C7 271 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 DCLK1O15075 740 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 TBC1D4O60343 1298 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 SORBS2O94875 1100 aaKnown RBP11.56□□□□□ -0.56
USF1-201ENST00000368019 ABLIM3O94929 683 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 BMP10O95393 424 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 PIGNO95427 931 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 H6PDO95479 791 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 COL4A2P08572 1712 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 ERVK-10P10266 1014 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 CDK4P11802 303 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 CDH2P19022 906 aaPredicted RBP11.56□□□□□ -0.56
USF1-201ENST00000368019 TFEBP19484 476 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 SLC7A1P30825 629 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 TTKP33981 857 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 NOS2P35228 1153 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 BRCC3P46736 316 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 ACADVLP49748 655 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 MRPS22P82650 360 aaKnown RBP11.56□□□□□ -0.56
USF1-201ENST00000368019 RHDQ02161 417 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 SCAPQ12770 1279 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 SLC12A1Q13621 1099 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 TRIM25Q14258 630 aaKnown RBP11.56□□□□□ -0.56
USF1-201ENST00000368019 SQLEQ14534 574 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 MLF2Q15773 248 aaPredicted RBP11.56□□□□□ -0.56
USF1-201ENST00000368019 KCTD21Q4G0X4 260 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 PPM1JQ5JR12 505 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 SLC8B1Q6J4K2 584 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 ANKS3Q6ZW76 656 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 CHSY3Q70JA7 882 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 LINC00523Q86TU6 105 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 CCDC185Q8N715 623 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 TERB1Q8NA31 727 aa11.56□□□□□ -0.56
USF1-201ENST00000368019 SUMF1Q8NBK3 374 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms