RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.51□□□□□ -0.89
VTA1-201ENST00000367621 SLC7A4O43246 635 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 RFPL1O75677 317 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 TRBC1P01850 177 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 INHBAP08476 426 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 ALPIP09923 528 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 VSIG8P0DPA2 414 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 HLA-EP13747 358 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 TIMP2P16035 220 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 CTPS1P17812 591 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 NR1D1P20393 614 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 SERPINA4P29622 427 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 HNF1BP35680 557 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 GRIA4P48058 902 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 CSRP3P50461 194 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 ENPP2Q13822 863 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 BMPR2Q13873 1038 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 ZNF234Q14588 700 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 NR6A1Q15406 480 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 SMAD2Q15796 467 aaKnown RBP9.51□□□□□ -0.89
VTA1-201ENST00000367621 SKIDA1Q1XH10 827 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 HNRNPA1L2Q32P51 320 aaKnown RBP9.51□□□□□ -0.89
VTA1-201ENST00000367621 DESI1Q6ICB0 168 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 NEPROQ6NW34 567 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 TXNDC11Q6PKC3 985 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 KDM7AQ6ZMT4 941 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 RYBPQ8N488 228 aaPredicted RBP9.51□□□□□ -0.89
VTA1-201ENST00000367621 SLC44A3Q8N4M1 653 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 ZNF366Q8N895 744 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 PNPLA1Q8N8W4 532 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 C2CD4AQ8NCU7 369 aaPredicted RBP9.51□□□□□ -0.89
VTA1-201ENST00000367621 ACVR1CQ8NER5 493 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 FAM76AQ8TAV0 307 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 MDM1Q8TC05 714 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 PDCD6IPQ8WUM4 868 aaKnown RBP9.51□□□□□ -0.89
VTA1-201ENST00000367621 HDAC10Q969S8 669 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 TBATAQ96M53 351 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 MCCC1Q96RQ3 725 aaPredicted RBP9.51□□□□□ -0.89
VTA1-201ENST00000367621 LYSMD1Q96S90 227 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 FAM129BQ96TA1 746 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 ACOX2Q99424 681 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 CPNE1Q99829 537 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 HEPHQ9BQS7 1158 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 PHF7Q9BWX1 381 aaPredicted RBP9.51□□□□□ -0.89
VTA1-201ENST00000367621 MFSD1Q9H3U5 465 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 ZDHHC6Q9H6R6 413 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 SUDS3Q9H7L9 328 aaPredicted RBP9.51□□□□□ -0.89
VTA1-201ENST00000367621 BRD9Q9H8M2 597 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 KCNK12Q9HB15 430 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 PPANQ9NQ55 473 aaKnown RBP9.51□□□□□ -0.89
VTA1-201ENST00000367621 TRPV5Q9NQA5 729 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 MARCH4Q9P2E8 410 aaPredicted RBP9.51□□□□□ -0.89
VTA1-201ENST00000367621 SARDHQ9UL12 918 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 STARD13Q9Y3M8 1113 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 DENND4AQ7Z401 1863 aa9.51□□□□□ -0.89
VTA1-201ENST00000367621 CCDC162PA2VCL2 907 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 TBC1D3BA6NDS4 549 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 TRIM49D1C9J1S8 452 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 K7EQS6 105 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 GAPDHSO14556 408 aaPredicted RBP9.5□□□□□ -0.89
VTA1-201ENST00000367621 TYROBPO43914 113 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 BNIP3LO60238 219 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 LEFTY1O75610 366 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 RPP40O75818 363 aaKnown RBP9.5□□□□□ -0.89
VTA1-201ENST00000367621 AHSGP02765 367 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 UGT2B4P06133 528 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 SNRPAP09012 282 aaKnown RBP9.5□□□□□ -0.89
VTA1-201ENST00000367621 HNRNPLP14866 589 aaKnown RBP eCLIP9.5□□□□□ -0.89
VTA1-201ENST00000367621 CA4P22748 312 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 HPDP32754 393 aaPredicted RBP9.5□□□□□ -0.89
VTA1-201ENST00000367621 GP5P40197 560 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 IL12RB1P42701 662 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 MAGEA12P43365 314 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 ABCG1P45844 678 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 SERPINB9P50453 376 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 METAP1P53582 386 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 PPP2R2AP63151 447 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 CBX1P83916 185 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 XIAPP98170 497 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 SLC18A2Q05940 514 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 LAMB3Q13751 1172 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 LEXMQ3ZCV2 418 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 ZNF789Q5FWF6 425 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 GRTP1Q5TC63 336 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 EGFLAMQ63HQ2 1017 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 CRTC1Q6UUV9 634 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 LYPD8Q6UX82 237 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 GDPD4Q6W3E5 623 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 LYSMD3Q7Z3D4 306 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 GLT6D1Q7Z4J2 308 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 STRA8Q7Z7C7 330 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 DENND6AQ8IWF6 608 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 SRRM1Q8IYB3 904 aaKnown RBP9.5□□□□□ -0.89
VTA1-201ENST00000367621 STK40Q8N2I9 435 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 OR4K2Q8NGD2 314 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 GPR150Q8NGU9 434 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 DENND1AQ8TEH3 1009 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 STYXQ8WUJ0 223 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 CDKL2Q92772 493 aa9.5□□□□□ -0.89
VTA1-201ENST00000367621 ISL2Q96A47 359 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms