RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 ARMC12Q5T9G4 340 aa14.85□□□□□ -0.03
CTSD-202ENST00000367196 TIGD7Q6NT04 549 aaPredicted RBP14.85□□□□□ -0.03
CTSD-202ENST00000367196 OGFOD3Q6PK18 319 aa14.85□□□□□ -0.03
CTSD-202ENST00000367196 CCNJLQ8IV13 435 aa14.85□□□□□ -0.03
CTSD-202ENST00000367196 FBXO39Q8N4B4 442 aa14.85□□□□□ -0.03
CTSD-202ENST00000367196 PRR11Q96HE9 360 aaPredicted RBP14.85□□□□□ -0.03
CTSD-202ENST00000367196 COQ10AQ96MF6 247 aa14.85□□□□□ -0.03
CTSD-202ENST00000367196 NUP85Q9BW27 656 aa14.85□□□□□ -0.03
CTSD-202ENST00000367196 LRRN3Q9H3W5 708 aa14.85□□□□□ -0.03
CTSD-202ENST00000367196 DPEP2Q9H4A9 486 aa14.85□□□□□ -0.03
CTSD-202ENST00000367196 LCMT1Q9UIC8 334 aa14.85□□□□□ -0.03
CTSD-202ENST00000367196 DNPEPQ9ULA0 475 aa14.85□□□□□ -0.03
CTSD-202ENST00000367196 PCDHGC4Q9Y5F7 938 aa14.85□□□□□ -0.03
CTSD-202ENST00000367196 PCDHGA7Q9Y5G6 932 aa14.85□□□□□ -0.03
CTSD-202ENST00000367196 KIF26BQ2KJY2 2108 aa14.84□□□□□ -0.03
CTSD-202ENST00000367196 A0A1W2PNU3 283 aaPredicted RBP14.84□□□□□ -0.03
CTSD-202ENST00000367196 A8MX80 341 aa14.84□□□□□ -0.03
CTSD-202ENST00000367196 B4DGG1 531 aa14.84□□□□□ -0.03
CTSD-202ENST00000367196 GOLGA6L19H0YKK7 550 aa14.84□□□□□ -0.03
CTSD-202ENST00000367196 MYO1FO00160 1098 aa14.84□□□□□ -0.03
CTSD-202ENST00000367196 NUDT21O43809 227 aaKnown RBP14.84□□□□□ -0.03
CTSD-202ENST00000367196 HEXIM1O94992 359 aaKnown RBP14.84□□□□□ -0.03
CTSD-202ENST00000367196 PYGLP06737 847 aa14.84□□□□□ -0.03
CTSD-202ENST00000367196 TPM3P06753 285 aa14.84□□□□□ -0.03
CTSD-202ENST00000367196 JMJD7P0C870 316 aa14.84□□□□□ -0.03
CTSD-202ENST00000367196 CA4P22748 312 aa14.84□□□□□ -0.03
CTSD-202ENST00000367196 TEAD1P28347 426 aa14.84□□□□□ -0.03
CTSD-202ENST00000367196 UBASH3AP57075 661 aa14.84□□□□□ -0.03
CTSD-202ENST00000367196 CCL7P80098 99 aa14.84□□□□□ -0.03
CTSD-202ENST00000367196 ARHGAP40Q5TG30 622 aa14.84□□□□□ -0.03
CTSD-202ENST00000367196 HGSNATQ68CP4 663 aa14.84□□□□□ -0.03
CTSD-202ENST00000367196 SPECC1LQ69YQ0 1117 aa14.84□□□□□ -0.03
CTSD-202ENST00000367196 RAET1GQ6H3X3 334 aa14.84□□□□□ -0.03
CTSD-202ENST00000367196 RAB11FIP2Q7L804 512 aa14.84□□□□□ -0.03
CTSD-202ENST00000367196 SNRNP27Q8WVK2 155 aaKnown RBP14.84□□□□□ -0.03
CTSD-202ENST00000367196 DTD2Q96FN9 168 aa14.84□□□□□ -0.03
CTSD-202ENST00000367196 SCRN2Q96FV2 425 aa14.84□□□□□ -0.03
CTSD-202ENST00000367196 TEX101Q9BY14 249 aa14.84□□□□□ -0.03
CTSD-202ENST00000367196 GSDMCQ9BYG8 508 aa14.84□□□□□ -0.03
CTSD-202ENST00000367196 POLR1EQ9GZS1 481 aaKnown RBP14.84□□□□□ -0.03
CTSD-202ENST00000367196 TMEM168Q9H0V1 697 aa14.84□□□□□ -0.03
CTSD-202ENST00000367196 THAP2Q9H0W7 228 aa14.84□□□□□ -0.03
CTSD-202ENST00000367196 CARS2Q9HA77 564 aaKnown RBP14.84□□□□□ -0.03
CTSD-202ENST00000367196 NOD2Q9HC29 1040 aa14.84□□□□□ -0.03
CTSD-202ENST00000367196 PCDH18Q9HCL0 1135 aa14.84□□□□□ -0.03
CTSD-202ENST00000367196 MRPL40Q9NQ50 206 aaKnown RBP14.84□□□□□ -0.03
CTSD-202ENST00000367196 ETNK2Q9NVF9 386 aa14.84□□□□□ -0.03
CTSD-202ENST00000367196 AKAP7Q9P0M2 348 aaPredicted RBP14.84□□□□□ -0.03
CTSD-202ENST00000367196 UNC13CQ8NB66 2214 aa14.83□□□□□ -0.04
CTSD-202ENST00000367196 GOLGA6CA6NDK9 693 aa14.83□□□□□ -0.04
CTSD-202ENST00000367196 GOLGA6BA6NDN3 693 aa14.83□□□□□ -0.04
CTSD-202ENST00000367196 NOBOXO60393 691 aa14.83□□□□□ -0.04
CTSD-202ENST00000367196 PGLSO95336 258 aa14.83□□□□□ -0.04
CTSD-202ENST00000367196 PEX11BO96011 259 aa14.83□□□□□ -0.04
CTSD-202ENST00000367196 CYP1A2P05177 515 aa14.83□□□□□ -0.04
CTSD-202ENST00000367196 GOLGA6DP0CG33 693 aa14.83□□□□□ -0.04
CTSD-202ENST00000367196 CCNB1P14635 433 aa14.83□□□□□ -0.04
CTSD-202ENST00000367196 GM2AP17900 193 aa14.83□□□□□ -0.04
CTSD-202ENST00000367196 CES1P23141 567 aa14.83□□□□□ -0.04
CTSD-202ENST00000367196 SSR1P43307 286 aaKnown RBP14.83□□□□□ -0.04
CTSD-202ENST00000367196 FANCCQ00597 558 aa14.83□□□□□ -0.04
CTSD-202ENST00000367196 SLC25A11Q02978 314 aaKnown RBP14.83□□□□□ -0.04
CTSD-202ENST00000367196 BIRC2Q13490 618 aa14.83□□□□□ -0.04
CTSD-202ENST00000367196 HLTFQ14527 1009 aaKnown RBP eCLIP14.83□□□□□ -0.04
CTSD-202ENST00000367196 NFKBIBQ15653 356 aa14.83□□□□□ -0.04
CTSD-202ENST00000367196 CLPPQ16740 277 aaPredicted RBP14.83□□□□□ -0.04
CTSD-202ENST00000367196 CCDC122Q5T0U0 273 aa14.83□□□□□ -0.04
CTSD-202ENST00000367196 DENND2CQ68D51 928 aa14.83□□□□□ -0.04
CTSD-202ENST00000367196 ALKBH5Q6P6C2 394 aaKnown RBP14.83□□□□□ -0.04
CTSD-202ENST00000367196 SPRED1Q7Z699 444 aa14.83□□□□□ -0.04
CTSD-202ENST00000367196 HEATR4Q86WZ0 1026 aa14.83□□□□□ -0.04
CTSD-202ENST00000367196 TP53INP2Q8IXH6 220 aa14.83□□□□□ -0.04
CTSD-202ENST00000367196 MCCC1Q96RQ3 725 aaPredicted RBP14.83□□□□□ -0.04
CTSD-202ENST00000367196 FUCA2Q9BTY2 467 aa14.83□□□□□ -0.04
CTSD-202ENST00000367196 CPNE5Q9HCH3 593 aa14.83□□□□□ -0.04
CTSD-202ENST00000367196 TRNAU1APQ9NX07 287 aaKnown RBP14.83□□□□□ -0.04
CTSD-202ENST00000367196 GOLGA6AQ9NYA3 693 aa14.83□□□□□ -0.04
CTSD-202ENST00000367196 LRIT1Q9P2V4 623 aa14.83□□□□□ -0.04
CTSD-202ENST00000367196 AMACRQ9UHK6 382 aa14.83□□□□□ -0.04
CTSD-202ENST00000367196 RABGEF1Q9UJ41 708 aa14.83□□□□□ -0.04
CTSD-202ENST00000367196 CAPN11Q9UMQ6 739 aa14.83□□□□□ -0.04
CTSD-202ENST00000367196 LUC7L2Q9Y383 392 aaKnown RBP14.83□□□□□ -0.04
CTSD-202ENST00000367196 A0A1W2PQM1 296 aa14.82□□□□□ -0.04
CTSD-202ENST00000367196 TCF4P15884 667 aa14.82□□□□□ -0.04
CTSD-202ENST00000367196 ZNF30P17039 623 aa14.82□□□□□ -0.04
CTSD-202ENST00000367196 UGT1A5P35504 534 aa14.82□□□□□ -0.04
CTSD-202ENST00000367196 ETV3P41162 512 aa14.82□□□□□ -0.04
CTSD-202ENST00000367196 MAXP61244 160 aa14.82□□□□□ -0.04
CTSD-202ENST00000367196 CDK3Q00526 305 aa14.82□□□□□ -0.04
CTSD-202ENST00000367196 DPTQ07507 201 aa14.82□□□□□ -0.04
CTSD-202ENST00000367196 ITKQ08881 620 aa14.82□□□□□ -0.04
CTSD-202ENST00000367196 TRAF2Q12933 501 aa14.82□□□□□ -0.04
CTSD-202ENST00000367196 MAP9Q49MG5 647 aa14.82□□□□□ -0.04
CTSD-202ENST00000367196 CCDC81Q6ZN84 652 aa14.82□□□□□ -0.04
CTSD-202ENST00000367196 B3GNT8Q7Z7M8 397 aa14.82□□□□□ -0.04
CTSD-202ENST00000367196 JAMLQ86YT9 394 aa14.82□□□□□ -0.04
CTSD-202ENST00000367196 MAP7D3Q8IWC1 876 aa14.82□□□□□ -0.04
CTSD-202ENST00000367196 PGBD5Q8N414 524 aa14.82□□□□□ -0.04
CTSD-202ENST00000367196 TEX26Q8N6G2 289 aa14.82□□□□□ -0.04
CTSD-202ENST00000367196 Q8N9G6 341 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms