RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 TMEM44Q2T9K0 475 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 PPM1LQ5SGD2 360 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 ANGEL2Q5VTE6 544 aaKnown RBP16.76■□□□□ 0.27
NID1-202ENST00000366595 ZNF613Q6PF04 617 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 DOK6Q6PKX4 331 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 POLNQ7Z5Q5 900 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 AGBL3Q8NEM8 1001 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 CXorf40AQ8TE69 158 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 NXF3Q9H4D5 531 aaKnown RBP16.76■□□□□ 0.27
NID1-202ENST00000366595 SETD4Q9NVD3 440 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 UGGT1Q9NYU2 1555 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 NCANO14594 1321 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 TOB1P50616 345 aaPredicted RBP16.76■□□□□ 0.27
NID1-202ENST00000366595 GTF2A2P52657 109 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 ZNF697Q5TEC3 545 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 EIF5AL1Q6IS14 154 aaKnown RBP16.76■□□□□ 0.27
NID1-202ENST00000366595 OR4A15Q8NGL6 344 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 FBXO6Q9NRD1 293 aaPredicted RBP16.76■□□□□ 0.27
NID1-202ENST00000366595 ACKR2O00590 384 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 DHX15O43143 795 aaKnown RBP16.76■□□□□ 0.27
NID1-202ENST00000366595 DNTTP04053 509 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 ITGA7Q13683 1181 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 MPP2Q14168 576 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 ZNF615Q8N8J6 731 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 SUSD6Q92537 303 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 RAD51AP1Q96B01 352 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 NXNL1Q96CM4 212 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 MGME1Q9BQP7 344 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 ZNF670Q9BS34 389 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.76■□□□□ 0.27
NID1-202ENST00000366595 ATPIF1Q9UII2 106 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 PRH1P02810 166 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 ZNF143P52747 638 aaPredicted RBP16.76■□□□□ 0.27
NID1-202ENST00000366595 FNDC3BQ53EP0 1204 aaKnown RBP16.76■□□□□ 0.27
NID1-202ENST00000366595 METTL21CQ5VZV1 264 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 KIAA0895Q8NCT3 520 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 HSFY1Q96LI6 401 aa16.76■□□□□ 0.27
NID1-202ENST00000366595 ABHD14A-ACY1A0A1B0GW23 586 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 IFNA7P01567 189 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 GPIP06744 558 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 COL6A2P12110 1019 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 PDHA2P29803 388 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 MIIPQ5JXC2 388 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 KCTD4Q8WVF5 259 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 SIPA1Q96FS4 1042 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 PXMP2Q9NR77 195 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 EMC3Q9P0I2 261 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 PNPLA6Q8IY17 1366 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 PRAMEF33A0A0G2JMD5 474 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 FADS2P1A8MWK0 482 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 FFAR3O14843 346 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 GPR42O15529 346 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 PRAMEF10O60809 474 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 TULP3O75386 442 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 CTSEP14091 401 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 PRDX6P30041 224 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 MTX3Q5HYI7 312 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 LAPTM4BQ86VI4 370 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 SVOPLQ8N434 492 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 SLC2A14Q8TDB8 520 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 NFASCO94856 1347 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 FRMPD4Q14CM0 1322 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 PRMT3O60678 531 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 ASMTP46597 345 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 SCUBE3Q8IX30 993 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 CXorf40BQ96DE9 158 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 ATP13A3Q9H7F0 1226 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 MKLN1Q9UL63 735 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.75■□□□□ 0.27
NID1-202ENST00000366595 SCN2BO60939 215 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 USP12O75317 370 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 TM7SF2O76062 418 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 SEPHS1P49903 392 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 AP1S1P61966 158 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 PPP1R15BQ5SWA1 713 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 SNX20Q7Z614 316 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 EZH1Q92800 747 aaPredicted RBP16.75■□□□□ 0.27
NID1-202ENST00000366595 TNKS2Q9H2K2 1166 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 RC3H2Q9HBD1 1191 aaKnown RBP16.75■□□□□ 0.27
NID1-202ENST00000366595 SNTG2Q9NY99 539 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 NUP50Q9UKX7 468 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 SPEF1Q9Y4P9 236 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 PDCD5O14737 125 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 ZBTB11O95625 1053 aaPredicted RBP16.75■□□□□ 0.27
NID1-202ENST00000366595 ANGPTL1O95841 491 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 PEPDP12955 493 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 WEE1P30291 646 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 PSEN1P49768 467 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 POU5F1Q01860 360 aaKnown RBP16.75■□□□□ 0.27
NID1-202ENST00000366595 ZNF234Q14588 700 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 TMEM119Q4V9L6 283 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 DNAJB7Q7Z6W7 309 aaPredicted RBP16.75■□□□□ 0.27
NID1-202ENST00000366595 CPSF7Q8N684 471 aaKnown RBP16.75■□□□□ 0.27
NID1-202ENST00000366595 IL1RAPQ9NPH3 570 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 GULP1Q9UBP9 304 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 BTRCQ9Y297 605 aa16.75■□□□□ 0.27
NID1-202ENST00000366595 CASTOR2A6NHX0 329 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 AIREO43918 545 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 CYP4B1P13584 511 aa16.74■□□□□ 0.27
NID1-202ENST00000366595 AMD1P17707 334 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms