RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 KXD1Q9BQD3 176 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 NDST4Q9H3R1 872 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 RETREG1Q9H6L5 497 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 JMJD4Q9H9V9 463 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 C17orf75Q9HAS0 396 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 HINT3Q9NQE9 182 aaKnown RBP3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 SLC6A13Q9NSD5 602 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 C1RLQ9NZP8 487 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 CEPT1Q9Y6K0 416 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 DOCK7Q96N67 2140 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 UTYO14607 1347 aa3.21□□□□□ -1.89
RNU4-48P-201ENST00000365559 SAA2-SAA4A0A096LPE2 208 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 A0A1W2PPH5 198 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 DENND3A2RUS2 1198 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 NPIPB15A6NHN6 443 aaPredicted RBP3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 SRCP12931 536 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 RGS2P41220 211 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 EIF3BP55884 814 aaKnown RBP3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 ILF3Q12906 894 aaKnown RBP eCLIP3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 PLEKHA7Q6IQ23 1121 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 SATL1Q86VE3 508 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 NR2C2APQ86WQ0 139 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 WDR63Q8IWG1 891 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 CHERPQ8IWX8 916 aaKnown RBP3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 ZNF441Q8N8Z8 693 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 PCYOX1LQ8NBM8 494 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 NAXEQ8NCW5 288 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 OR2AK2Q8NG84 335 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 SPATA20Q8TB22 786 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 METTL6Q8TCB7 284 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 KCNG4Q8TDN1 519 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 PSPC1Q8WXF1 523 aaKnown RBP3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 GTF3C6Q969F1 213 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 PPM1MQ96MI6 270 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 IL17FQ96PD4 163 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 ZNF385AQ96PM9 386 aaKnown RBP3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 PKP4Q99569 1192 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 C1QTNF5Q9BXJ0 243 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 PPP1R3EQ9H7J1 279 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 KIF9Q9HAQ2 790 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 SCPEP1Q9HB40 452 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 MMP25Q9NPA2 562 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 TAS2R10Q9NYW0 307 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 SMARCAL1Q9NZC9 954 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 ZNF224Q9NZL3 707 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 SIX4Q9UIU6 781 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 HAO1Q9UJM8 370 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 KCNS2Q9ULS6 477 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 ERVK-11Q9UQG0 969 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 TMEM98Q9Y2Y6 226 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 AAR2Q9Y312 384 aaKnown RBP3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 PSAT1Q9Y617 370 aa3.21□□□□□ -1.9
RNU4-48P-201ENST00000365559 TTC36A6NLP5 189 aa3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 PRAC2D3DTV9 90 aa3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 ZNF587BE7ETH6 402 aa3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 TULP2O00295 520 aa3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 CLGNO14967 610 aa3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 RFPL2O75678 378 aa3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 DDNO94850 711 aaPredicted RBP3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 HOXB5P09067 269 aa3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 IL7RP16871 459 aa3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 PIP4K2AP48426 406 aaPredicted RBP3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 NLRP5P59047 1200 aa3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 SEC61BP60468 96 aaKnown RBP3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 ECT2LQ008S8 904 aa3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 TMEM115Q12893 351 aaPredicted RBP3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 FOXD4Q12950 439 aaPredicted RBP3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 ZBTB17Q13105 803 aa3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 DCTN2Q13561 401 aaKnown RBP3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 TNFAIP1Q13829 316 aa3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 DRAP1Q14919 205 aaPredicted RBP3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 CTF1Q16619 201 aa3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 FAM76BQ5HYJ3 339 aa3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 CXorf66Q5JRM2 361 aaPredicted RBP3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 JAKMIP3Q5VZ66 844 aa3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 CDC73Q6P1J9 531 aa3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 METTL2BQ6P1Q9 378 aaKnown RBP3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 ATF7IPQ6VMQ6 1270 aa3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 PQLC2Q6ZP29 291 aa3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 CCDC13Q8IYE1 715 aa3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 WFIKKN2Q8TEU8 576 aa3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 SORCS1Q8WY21 1168 aa3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 METTL2AQ96IZ6 378 aaKnown RBP3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 PPP1R13BQ96KQ4 1090 aa3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 PRKRIP1Q9H875 184 aaPredicted RBP3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 LRRC4Q9HBW1 653 aa3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 ASAH2Q9NR71 780 aa3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 ABI3Q9P2A4 366 aa3.2□□□□□ -1.9
RNU4-48P-201ENST00000365559 SCN5AQ14524 2016 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 FAM237AA0A1B0GTK4 181 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 HNRNPCL2B2RXH8 293 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 VCYO14598 125 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 SEC14L2O76054 403 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 BDKRB2P30411 391 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 ELF1P32519 619 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 PBX3P40426 434 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 CCR9P51686 369 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 RARSP54136 660 aaKnown RBP3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 RAD23BP54727 409 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms