RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 GLUD2P49448 558 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 METAP2P50579 478 aaKnown RBP eCLIP4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 ARF3P61204 181 aaPredicted RBP4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 ARF1P84077 181 aaKnown RBP4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 GOLGA8DPQ0D2H9 430 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 USP41Q3LFD5 358 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 PLEKHA7Q6IQ23 1121 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 DLK2Q6UY11 383 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 FOXRED2Q8IWF2 684 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 ARHGAP12Q8IWW6 846 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 CLIP4Q8N3C7 705 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 CLEC18CQ8NCF0 446 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 WASF1Q92558 559 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 NEUROG1Q92886 237 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 TMEM68Q96MH6 324 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 CSF3RQ99062 836 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 TMEM47Q9BQJ4 181 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 NTPCRQ9BSD7 190 aaKnown RBP4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 SLC28A3Q9HAS3 691 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 RANGRFQ9HD47 186 aaPredicted RBP4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 NOX4Q9NPH5 578 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 HINT3Q9NQE9 182 aaKnown RBP4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 CNGB3Q9NQW8 809 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 HCFC1R1Q9NWW0 138 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 ERVK-11Q9UQG0 969 aa4.34□□□□□ -1.71
RNU6-560P-201ENST00000364007 IGLV5-52A0A0A0MRZ9 124 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 C1orf226A1L170 272 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 FSD2A1L4K1 749 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 FRMD3A2A2Y4 597 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 PRSS47A8MTI9 375 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 AKR1B15C9JRZ8 316 aaPredicted RBP4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 VCYO14598 125 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 AP3D1O14617 1153 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 NDUFS7O75251 213 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 IPO7O95373 1038 aaKnown RBP4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 ACAA1P09110 424 aaPredicted RBP4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 ZNF12P17014 697 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 CD58P19256 250 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 PPARGP37231 505 aaPredicted RBP4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 PDLIM4P50479 330 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 NANOS2P60321 138 aaKnown RBP4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 DDR1Q08345 913 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 DSC1Q08554 894 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 NIPAL4Q0D2K0 466 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 PLCB4Q15147 1175 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 CDONQ4KMG0 1287 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 C6orf141Q5SZD1 244 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 FAM69BQ5VUD6 431 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 FAM205BPQ63HN1 556 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 ITPRIPL1Q6GPH6 555 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 KLHL35Q6PF15 583 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 PQLC2Q6ZP29 291 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 PGBD5Q8N414 524 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 TTC39CQ8N584 583 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 TMED6Q8WW62 240 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 ZNF479Q96JC4 524 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 CMTM3Q96MX0 182 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 SDF4Q9BRK5 362 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 GHITMQ9H3K2 345 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 PDZD7Q9H5P4 517 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 PPP1R3EQ9H7J1 279 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 RRP7BPQ9NSQ0 103 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 TINAGQ9UJW2 476 aa4.33□□□□□ -1.72
RNU6-560P-201ENST00000364007 RSF1Q96T23 1441 aaPredicted RBP4.32□□□□□ -1.72
RNU6-560P-201ENST00000364007 PTGES3LE9PB15 166 aa4.32□□□□□ -1.72
RNU6-560P-201ENST00000364007 KCNJ13O60928 360 aa4.32□□□□□ -1.72
RNU6-560P-201ENST00000364007 OR2C1O95371 312 aa4.32□□□□□ -1.72
RNU6-560P-201ENST00000364007 MAOAP21397 527 aa4.32□□□□□ -1.72
RNU6-560P-201ENST00000364007 TM4SF1P30408 202 aa4.32□□□□□ -1.72
RNU6-560P-201ENST00000364007 STX2P32856 288 aa4.32□□□□□ -1.72
RNU6-560P-201ENST00000364007 GALCP54803 685 aa4.32□□□□□ -1.72
RNU6-560P-201ENST00000364007 FOXG1P55316 489 aaPredicted RBP4.32□□□□□ -1.72
RNU6-560P-201ENST00000364007 DHX34Q14147 1143 aaKnown RBP4.32□□□□□ -1.72
RNU6-560P-201ENST00000364007 GKAP1Q5VSY0 366 aaPredicted RBP4.32□□□□□ -1.72
RNU6-560P-201ENST00000364007 MZT2BQ6NZ67 158 aa4.32□□□□□ -1.72
RNU6-560P-201ENST00000364007 C8orf82Q6P1X6 216 aaPredicted RBP4.32□□□□□ -1.72
RNU6-560P-201ENST00000364007 CLEC17AQ6ZS10 378 aa4.32□□□□□ -1.72
RNU6-560P-201ENST00000364007 TAOK1Q7L7X3 1001 aa4.32□□□□□ -1.72
RNU6-560P-201ENST00000364007 IQCF1Q8N6M8 205 aa4.32□□□□□ -1.72
RNU6-560P-201ENST00000364007 ARHGEF26Q96DR7 871 aa4.32□□□□□ -1.72
RNU6-560P-201ENST00000364007 C1orf74Q96LT6 269 aa4.32□□□□□ -1.72
RNU6-560P-201ENST00000364007 KXD1Q9BQD3 176 aa4.32□□□□□ -1.72
RNU6-560P-201ENST00000364007 WACQ9BTA9 647 aa4.32□□□□□ -1.72
RNU6-560P-201ENST00000364007 IFIH1Q9BYX4 1025 aaKnown RBP4.32□□□□□ -1.72
RNU6-560P-201ENST00000364007 MMP25Q9NPA2 562 aa4.32□□□□□ -1.72
RNU6-560P-201ENST00000364007 OCIAD1Q9NX40 245 aa4.32□□□□□ -1.72
RNU6-560P-201ENST00000364007 LAS1LQ9Y4W2 734 aaKnown RBP4.32□□□□□ -1.72
RNU6-560P-201ENST00000364007 SNX9Q9Y5X1 595 aa4.32□□□□□ -1.72
RNU6-560P-201ENST00000364007 LYVE1Q9Y5Y7 322 aa4.32□□□□□ -1.72
RNU6-560P-201ENST00000364007 CPED1A4D0V7 1026 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 MYO1GB0I1T2 1018 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 SOCS6O14544 535 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 INSIG1O15503 277 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 SMAD6O43541 496 aaKnown RBP4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 SLC25A12O75746 678 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 GFPT2O94808 682 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 PRSS2P07478 247 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 NGFRP08138 427 aa4.31□□□□□ -1.72
RNU6-560P-201ENST00000364007 SNHG28P0DPA3 235 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms