RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.51□□□□□ -0.25
CCDC197-201ENST00000359253 TCP11X1B4DZS4 312 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 K7ERQ8 282 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 EBAG9O00559 213 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 TRBC1P01850 177 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 C2P06681 752 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 DLDP09622 509 aaKnown RBP13.51□□□□□ -0.25
CCDC197-201ENST00000359253 STMN1P16949 149 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 TAC1P20366 129 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 EIF2DP41214 584 aaKnown RBP13.51□□□□□ -0.25
CCDC197-201ENST00000359253 SERPINB4P48594 390 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 PRKAA2P54646 552 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 RAB10P61026 200 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 ST8SIA6P61647 398 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 CTBP1Q13363 440 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 USP10Q14694 798 aaKnown RBP13.51□□□□□ -0.25
CCDC197-201ENST00000359253 ZKSCAN8Q15776 578 aaPredicted RBP13.51□□□□□ -0.25
CCDC197-201ENST00000359253 TSNAXIP1Q2TAA8 658 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 ACCSLQ4AC99 568 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 GLIPR1L2Q4G1C9 344 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 ZDHHC20Q5W0Z9 365 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 FAM45BPQ6NSW5 357 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 NUDT18Q6ZVK8 323 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 GET4Q7L5D6 327 aaPredicted RBP13.51□□□□□ -0.25
CCDC197-201ENST00000359253 PIGWQ7Z7B1 504 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 RNF135Q8IUD6 432 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 ETFBKMTQ8IXQ9 262 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 YAF2Q8IY57 180 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 LRRC34Q8IZ02 419 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 CBARPQ8N350 705 aaPredicted RBP13.51□□□□□ -0.25
CCDC197-201ENST00000359253 TTC30BQ8N4P2 665 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 ANKS4BQ8N8V4 417 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 MDGA1Q8NFP4 955 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 RDH11Q8TC12 318 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 FAM45AQ8TCE6 357 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 PDCD6IPQ8WUM4 868 aaKnown RBP13.51□□□□□ -0.25
CCDC197-201ENST00000359253 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.51□□□□□ -0.25
CCDC197-201ENST00000359253 ELSPBP1Q96BH3 223 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 ECHDC3Q96DC8 303 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 DNAJC1Q96KC8 554 aaKnown RBP13.51□□□□□ -0.25
CCDC197-201ENST00000359253 TBATAQ96M53 351 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 LRRC3BQ96PB8 259 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 TTC1Q99614 292 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 TM6SF2Q9BZW4 377 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 MANSC1Q9H8J5 431 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 KCNK12Q9HB15 430 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 POPDC3Q9HBV1 291 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 DEC1Q9P2X7 70 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 GGT7Q9UJ14 662 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 SPO11Q9Y5K1 396 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 COMMD10Q9Y6G5 202 aa13.51□□□□□ -0.25
CCDC197-201ENST00000359253 FAM95CA0A1B0GW59 222 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 CCDC78A2IDD5 438 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 CCDC162PA2VCL2 907 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 GOLGA8TH3BQL2 631 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 ECI2O75521 394 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 S1PR4O95977 384 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 GOT2P00505 430 aaKnown RBP13.5□□□□□ -0.25
CCDC197-201ENST00000359253 NEFHP12036 1026 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 CD9P21926 228 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 GABRB3P28472 473 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 VIPR2P41587 438 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 TTPAP49638 278 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 ARSDP51689 593 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 TYSND1Q2T9J0 566 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 LYPLAL1Q5VWZ2 237 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 GRAMD4Q6IC98 578 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 BRAT1Q6PJG6 821 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 CERS6Q6ZMG9 384 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 USP45Q70EL2 814 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 PTAR1Q7Z6K3 402 aaPredicted RBP13.5□□□□□ -0.25
CCDC197-201ENST00000359253 CLEC14AQ86T13 490 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 CAMK1DQ8IU85 385 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 DENND6AQ8IWF6 608 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 RAVER1Q8IY67 606 aaKnown RBP13.5□□□□□ -0.25
CCDC197-201ENST00000359253 UBALD2Q8IYN6 164 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 STK40Q8N2I9 435 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 RYBPQ8N488 228 aaPredicted RBP13.5□□□□□ -0.25
CCDC197-201ENST00000359253 OTUD6BQ8N6M0 293 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 PAF1Q8N7H5 531 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 OR4K2Q8NGD2 314 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 ZNF75CPQ92670 426 aaPredicted RBP13.5□□□□□ -0.25
CCDC197-201ENST00000359253 SCRN2Q96FV2 425 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 RPL10LQ96L21 214 aaKnown RBP13.5□□□□□ -0.25
CCDC197-201ENST00000359253 HEPHQ9BQS7 1158 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 COL25A1Q9BXS0 654 aaPredicted RBP13.5□□□□□ -0.25
CCDC197-201ENST00000359253 PITPNM3Q9BZ71 974 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 GPR63Q9BZJ6 419 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 ECT2Q9H8V3 914 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 MLXIPLQ9NP71 852 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 CD320Q9NPF0 282 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 IL17CQ9P0M4 197 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 SLC17A7Q9P2U7 560 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 SLC17A6Q9P2U8 582 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 APPL1Q9UKG1 709 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 SLC39A10Q9ULF5 831 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 PLA2G4CQ9UP65 541 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 ACOT9Q9Y305 439 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 STARD13Q9Y3M8 1113 aa13.5□□□□□ -0.25
CCDC197-201ENST00000359253 ZNF711Q9Y462 761 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms