RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 AP5B1Q2VPB7 878 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 TIMM50Q3ZCQ8 353 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 INTS11Q5TA45 600 aaKnown RBP13.74□□□□□ -0.21
VCP-201ENST00000358901 VN1R5Q7Z5H4 357 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 RALGPS2Q86X27 583 aaPredicted RBP13.74□□□□□ -0.21
VCP-201ENST00000358901 WDR36Q8NI36 951 aaKnown RBP13.74□□□□□ -0.21
VCP-201ENST00000358901 ZNF483Q8TF39 744 aaPredicted RBP13.74□□□□□ -0.21
VCP-201ENST00000358901 GIPC3Q8TF64 312 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 CLEC4CQ8WTT0 213 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 MCRS1Q96EZ8 462 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 RPS6KA6Q9UK32 745 aa13.74□□□□□ -0.21
VCP-201ENST00000358901 ZNF214Q9UL59 606 aaPredicted RBP13.74□□□□□ -0.21
VCP-201ENST00000358901 TRIM43BA6NCK2 446 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 RFXANKO14593 260 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 DHX15O43143 795 aaKnown RBP13.73□□□□□ -0.21
VCP-201ENST00000358901 LMO2P25791 158 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 PTPN3P26045 913 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 LILRA4P59901 499 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 RAB14P61106 215 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 SMAD3P84022 425 aaKnown RBP13.73□□□□□ -0.21
VCP-201ENST00000358901 TUSC3Q13454 348 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 ZNF460Q14592 562 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 ZYG11AQ6WRX3 759 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 CYP4Z2PQ8N1L4 340 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 ATAD1Q8NBU5 361 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 OR6K2Q8NGY2 324 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 TSSK3Q96PN8 268 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 BBS4Q96RK4 519 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 HBEGFQ99075 208 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 ZNF395Q9H8N7 513 aaPredicted RBP13.73□□□□□ -0.21
VCP-201ENST00000358901 SLC17A6Q9P2U8 582 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 SIGLEC1Q9BZZ2 1709 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 CLTBP09497 229 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 HOXC6P09630 235 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 ASPAP45381 313 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 GALK1P51570 392 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 AQP4P55087 323 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 MTSS1LQ765P7 747 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 TMEM192Q8IY95 271 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 GPR156Q8NFN8 814 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 OR2T34Q8NGX1 318 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 OR2T3Q8NH03 318 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 CLHC1Q8NHS4 586 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 FBXL18Q96ME1 805 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 HDHD2Q9H0R4 259 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 EPB41L4BQ9H329 900 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 BTBD3Q9Y2F9 522 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 POLR3HQ9Y535 204 aaPredicted RBP13.73□□□□□ -0.21
VCP-201ENST00000358901 SF3B1O75533 1304 aaKnown RBP eCLIP13.73□□□□□ -0.21
VCP-201ENST00000358901 SOWAHBA6NEL2 793 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 RNASEH1O60930 286 aaKnown RBP13.73□□□□□ -0.21
VCP-201ENST00000358901 PAICSP22234 425 aaKnown RBP13.73□□□□□ -0.21
VCP-201ENST00000358901 RXRGP48443 463 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 PRKAG1P54619 331 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 GAD2Q05329 585 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 SETMARQ53H47 684 aaPredicted RBP13.73□□□□□ -0.21
VCP-201ENST00000358901 GLYATQ6IB77 296 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 FAM151BQ6UXP7 276 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 UNC5BQ8IZJ1 945 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 CBR4Q8N4T8 237 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 DPP10Q8N608 796 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 ZHX1-C8orf76Q96EF9 292 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 EBF3Q9H4W6 596 aa13.73□□□□□ -0.21
VCP-201ENST00000358901 COPG1Q9Y678 874 aaKnown RBP13.73□□□□□ -0.21
VCP-201ENST00000358901 SMIM35A0A1B0GVV1 85 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 BBIP1A8MTZ0 92 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 TREHO43280 583 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 PKMP14618 531 aaKnown RBP13.72□□□□□ -0.21
VCP-201ENST00000358901 FEN1P39748 380 aaKnown RBP13.72□□□□□ -0.21
VCP-201ENST00000358901 ACTR3P61158 418 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 NAA20P61599 178 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 MAP2K5Q13163 448 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 ALFQ53S48 1182 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 RICTORQ6R327 1708 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 SNED1Q8TER0 1413 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 UBASH3BQ8TF42 649 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 REPS1Q96D71 796 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 TMEM106CQ9BVX2 250 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 KRCC1Q9NPI7 259 aaPredicted RBP13.72□□□□□ -0.21
VCP-201ENST00000358901 ZMYND8Q9ULU4 1186 aaPredicted RBP13.72□□□□□ -0.21
VCP-201ENST00000358901 GTF2A1LQ9UNN4 478 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 A0A1W2PQH9 124 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 MYBPHLA2RUH7 354 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 CXorf49A8MYA2 514 aaPredicted RBP13.72□□□□□ -0.21
VCP-201ENST00000358901 NT5C1B-RDH14C9J2C7 533 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 MSCO60682 206 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 CYP4B1P13584 511 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 L1CAMP32004 1257 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 DSC2Q02487 901 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 TAF10Q12962 218 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 DPYSQ14117 519 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 SPIDRQ14159 915 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 SKIV2LQ15477 1246 aaKnown RBP13.72□□□□□ -0.21
VCP-201ENST00000358901 PABPC1LQ4VXU2 614 aaKnown RBP13.72□□□□□ -0.21
VCP-201ENST00000358901 ATAD3BQ5T9A4 648 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 DOK6Q6PKX4 331 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 FGD2Q7Z6J4 655 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 MPP5Q8N3R9 675 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 PSMA8Q8TAA3 256 aa13.72□□□□□ -0.21
VCP-201ENST00000358901 ENKURQ8TC29 256 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms