RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 AQP12BA6NM10 295 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 MARSP56192 900 aaKnown RBP6.08□□□□□ -1.44
VPS13B-203ENST00000358544 MPP2Q14168 576 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 LSM12Q3MHD2 195 aaKnown RBP6.08□□□□□ -1.44
VPS13B-203ENST00000358544 ZNF404Q494X3 552 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 AQP12AQ8IXF9 295 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 TMEM199Q8N511 208 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 DNAJC19Q96DA6 116 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 TTYH2Q9BSA4 534 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 ADAMTS10Q9H324 1103 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 PDGFCQ9NRA1 345 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 FAM25EA8MYX2 175 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 SUV39H1O43463 412 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 ABCB7O75027 752 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 CCNYL3P0C7X3 344 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 PCSK2P16519 638 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 ZNF182P17025 639 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-203ENST00000358544 DLG2Q15700 870 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 USP39Q53GS9 565 aaKnown RBP6.08□□□□□ -1.44
VPS13B-203ENST00000358544 SLC15A4Q8N697 577 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 FBXL20Q96IG2 436 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 CELF6Q96J87 481 aaKnown RBP6.08□□□□□ -1.44
VPS13B-203ENST00000358544 GLT1D1Q96MS3 346 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 FEM1AQ9BSK4 669 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 XPR1Q9UBH6 696 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 MALT1Q9UDY8 824 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 H3BN98 237 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 HTRA2O43464 458 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-203ENST00000358544 GRIA2P42262 883 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 CACNB3P54284 484 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 IL18Q14116 193 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 NKX1-1Q15270 411 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-203ENST00000358544 TMEM198Q66K66 360 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 CXXC5Q7LFL8 322 aaKnown RBP6.08□□□□□ -1.44
VPS13B-203ENST00000358544 ADGRG6Q86SQ4 1221 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 EEF1AKMT1Q8WVE0 214 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 PHOX2BQ99453 314 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 CYP3A43Q9HB55 503 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 SH3BP4Q9P0V3 963 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 SUCOQ9UBS9 1254 aaKnown RBP6.08□□□□□ -1.44
VPS13B-203ENST00000358544 ST14Q9Y5Y6 855 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 CDH1P12830 882 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 PIK3CGP48736 1102 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 MAPK12P53778 367 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 EIF2B5Q13144 721 aaKnown RBP6.08□□□□□ -1.44
VPS13B-203ENST00000358544 PRKD1Q15139 912 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-203ENST00000358544 ZNF621Q6ZSS3 439 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 COMMD7Q86VX2 200 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 CLYBLQ8N0X4 340 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 ANKRD52Q8NB46 1076 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 OXCT2Q9BYC2 517 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-203ENST00000358544 TRIT1Q9H3H1 467 aaKnown RBP6.08□□□□□ -1.44
VPS13B-203ENST00000358544 POLE4Q9NR33 117 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 CISHQ9NSE2 258 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 STAU1O95793 577 aaKnown RBP6.08□□□□□ -1.44
VPS13B-203ENST00000358544 LTKP29376 864 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 MAGEA2P43356 314 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 MAP2K4P45985 399 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 CLCN5P51795 746 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 RAB10P61026 200 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 OCLNQ16625 522 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 TTC23LQ6PF05 361 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 SLC37A3Q8NCC5 494 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 ANKRD49Q8WVL7 239 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 HOPXQ9BPY8 73 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-203ENST00000358544 NKIRAS2Q9NYR9 191 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 MGAT4DA6NG13 374 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 H0YJX3 145 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 OGTO15294 1046 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 DNAJA2O60884 412 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 INMTO95050 263 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 COX7A2P14406 83 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 IL7RP16871 459 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 NAT1P18440 290 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 ZNF143P52747 638 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-203ENST00000358544 SLC12A3P55017 1021 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 DEFA5Q01523 94 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 ASTE1Q2TB18 679 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-203ENST00000358544 TMEM236Q5W0B7 351 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 SLC2A7Q6PXP3 512 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 CLHC1Q8NHS4 586 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 ASB9Q96DX5 294 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 COA1Q9GZY4 146 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 XPNPEP1Q9NQW7 623 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 HSPB11Q9Y547 144 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 F5H6K3 240 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 MTA2O94776 668 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 ERP29P30040 261 aaKnown RBP6.08□□□□□ -1.44
VPS13B-203ENST00000358544 NDUFAF6Q330K2 333 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 XKR3Q5GH77 459 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 Q6ZNX1 250 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 AFG1LQ8WV93 481 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 SLC30A2Q9BRI3 323 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 TLE6Q9H808 572 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 CHMP1AQ9HD42 196 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-203ENST00000358544 SNTG1Q9NSN8 517 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 ZFYVE26Q68DK2 2539 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 COL9A3Q14050 684 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-203ENST00000358544 GLYATQ6IB77 296 aa6.08□□□□□ -1.44
VPS13B-203ENST00000358544 RALGPS2Q86X27 583 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms