RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 TNFSF9P41273 254 aa9.34□□□□□ -0.91
SMARCAL1-202ENST00000358207 ABCG1P45844 678 aa9.34□□□□□ -0.91
SMARCAL1-202ENST00000358207 CPT1AP50416 773 aa9.34□□□□□ -0.91
SMARCAL1-202ENST00000358207 NLRP11P59045 1033 aaKnown RBP9.34□□□□□ -0.91
SMARCAL1-202ENST00000358207 GPC5P78333 572 aa9.34□□□□□ -0.91
SMARCAL1-202ENST00000358207 TAP1Q03518 808 aa9.34□□□□□ -0.91
SMARCAL1-202ENST00000358207 SLC10A2Q12908 348 aaPredicted RBP9.34□□□□□ -0.91
SMARCAL1-202ENST00000358207 CAPSQ13938 189 aa9.34□□□□□ -0.91
SMARCAL1-202ENST00000358207 EFCAB12Q6NXP0 572 aa9.34□□□□□ -0.91
SMARCAL1-202ENST00000358207 LYSMD2Q8IV50 215 aa9.34□□□□□ -0.91
SMARCAL1-202ENST00000358207 NUDCD3Q8IVD9 361 aa9.34□□□□□ -0.91
SMARCAL1-202ENST00000358207 CLYBLQ8N0X4 340 aa9.34□□□□□ -0.91
SMARCAL1-202ENST00000358207 CELF2-AS1Q8N7Q2 184 aa9.34□□□□□ -0.91
SMARCAL1-202ENST00000358207 GRPEL2Q8TAA5 225 aa9.34□□□□□ -0.91
SMARCAL1-202ENST00000358207 RAB2BQ8WUD1 216 aa9.34□□□□□ -0.91
SMARCAL1-202ENST00000358207 SLC44A1Q8WWI5 657 aa9.34□□□□□ -0.91
SMARCAL1-202ENST00000358207 FKBP10Q96AY3 582 aa9.34□□□□□ -0.91
SMARCAL1-202ENST00000358207 MINDY3Q9H8M7 445 aa9.34□□□□□ -0.91
SMARCAL1-202ENST00000358207 ERVMER34-1Q9H9K5 563 aa9.34□□□□□ -0.91
SMARCAL1-202ENST00000358207 ITM2CQ9NQX7 267 aa9.34□□□□□ -0.91
SMARCAL1-202ENST00000358207 ANKEF1Q9NU02 776 aa9.34□□□□□ -0.91
SMARCAL1-202ENST00000358207 RNF112Q9ULX5 631 aa9.34□□□□□ -0.91
SMARCAL1-202ENST00000358207 VWA7Q9Y334 891 aa9.34□□□□□ -0.91
SMARCAL1-202ENST00000358207 MAFBQ9Y5Q3 323 aaPredicted RBP9.34□□□□□ -0.91
SMARCAL1-202ENST00000358207 MYADML2A6NDP7 307 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 LEUTXA8MZ59 168 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 DCXO43602 365 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 OR5F1O95221 314 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 NDST3O95803 873 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 GOT2P00505 430 aaKnown RBP9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 PGK1P00558 417 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 ASGR1P07306 291 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 CLEC2LP0C7M8 214 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 IFI30P13284 250 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 MAN1A1P33908 653 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 MRPS5P82675 430 aaKnown RBP9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 TNFAIP2Q03169 654 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 MMRN1Q13201 1228 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 TCEAL1Q15170 157 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 SNRNP35Q16560 246 aaKnown RBP9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 PDPK2PQ6A1A2 396 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 PMF1Q6P1K2 205 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 C16orf59Q7L2K0 433 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 IL17RDQ8NFM7 739 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 OR6J1Q8NGC5 347 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 DHX38Q92620 1227 aaKnown RBP9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 GTF2H4Q92759 462 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 TMEM80Q96HE8 168 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 CDX2Q99626 313 aaPredicted RBP9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 FOXP3Q9BZS1 431 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 HAPLN2Q9GZV7 340 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 LHPPQ9H008 270 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 ACSS3Q9H6R3 686 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 PPCSQ9HAB8 311 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 NTN4Q9HB63 628 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 IL37Q9NZH6 218 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 PMF1-BGLAPU3KQ54 211 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 TRIP12Q14669 1992 aaPredicted RBP9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 BET1O15155 118 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 PDPK1O15530 556 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 B4GAT1O43505 415 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 BCAS2O75934 225 aaPredicted RBP9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 FGF18O76093 207 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 LGALS2P05162 132 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 SYN1P17600 705 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 TNNI1P19237 187 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 CDH5P33151 784 aaPredicted RBP9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 SEPHS1P49903 392 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 ARHGAP1Q07960 439 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 ATF7IP2Q5U623 682 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 SLC16A12Q6ZSM3 486 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 STXBP4Q6ZWJ1 553 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 UNC45BQ8IWX7 931 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 AFAP1L2Q8N4X5 818 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 AADATQ8N5Z0 425 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 XXYLT1Q8NBI6 393 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 SNAPC3Q92966 411 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 SLCO4A1Q96BD0 722 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 CPB2Q96IY4 423 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 ST6GAL2Q96JF0 529 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 RNF170Q96K19 258 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 TUBA1CQ9BQE3 449 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 DNAI2Q9GZS0 605 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 MTIF3Q9H2K0 278 aaKnown RBP9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 NOL11Q9H8H0 719 aaKnown RBP9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 FANCFQ9NPI8 374 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 ABCB10Q9NRK6 738 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 NRBP2Q9NSY0 501 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 C20orf96Q9NUD7 363 aaPredicted RBP9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 ACOXLQ9NUZ1 547 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 ATP6V1HQ9UI12 483 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 KLF15Q9UIH9 416 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 GMEB2Q9UKD1 530 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 CENPXA8MT69 81 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 FOXN3O00409 490 aaPredicted RBP9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 NRP1O14786 923 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 NCF2P19878 526 aaPredicted RBP9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 MMP8P22894 467 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 ICAM3P32942 547 aa9.33□□□□□ -0.92
SMARCAL1-202ENST00000358207 SOX9P48436 509 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms