RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 TSPAN11A1L157 253 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 H7C0S8 307 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 TPP1O14773 563 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 MBTPS2O43462 519 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 RPA3P35244 121 aaPredicted RBP17.07■□□□□ 0.32
TPM1-205ENST00000357980 SOX9P48436 509 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 NEK3P51956 506 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 AAK1Q2M2I8 961 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 PREPLQ4J6C6 727 aaPredicted RBP17.07■□□□□ 0.32
TPM1-205ENST00000357980 BRAT1Q6PJG6 821 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 GABPB2Q8TAK5 448 aaPredicted RBP17.07■□□□□ 0.32
TPM1-205ENST00000357980 ACMSDQ8TDX5 336 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 SCRN2Q96FV2 425 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 LRIG1Q96JA1 1093 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 KLHL32Q96NJ5 620 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 OSBPL1AQ9BXW6 950 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 INTS9Q9NV88 658 aaKnown RBP17.07■□□□□ 0.32
TPM1-205ENST00000357980 IL36AQ9UHA7 158 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 MTO1Q9Y2Z2 717 aaKnown RBP17.07■□□□□ 0.32
TPM1-205ENST00000357980 C1orf232A0A0U1RR37 186 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 NPIPB15A6NHN6 443 aaPredicted RBP17.07■□□□□ 0.32
TPM1-205ENST00000357980 A6NNZ2 444 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 STX7O15400 261 aaKnown RBP17.07■□□□□ 0.32
TPM1-205ENST00000357980 LEPRP48357 1165 aaKnown RBP17.07■□□□□ 0.32
TPM1-205ENST00000357980 CSRP3P50461 194 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 GABPB1Q06547 395 aaPredicted RBP17.07■□□□□ 0.32
TPM1-205ENST00000357980 TUBB8Q3ZCM7 444 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 ARSIQ5FYB1 569 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 C9orf64Q5T6V5 341 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 AFTPHQ6ULP2 937 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 USP45Q70EL2 814 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 PAF1Q8N7H5 531 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 ANKRD42Q8N9B4 389 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 ACVR1CQ8NER5 493 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 OR4L1Q8NH43 312 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 UCMAQ8WVF2 138 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 GPR63Q9BZJ6 419 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 ZFYVE1Q9HBF4 777 aa17.07■□□□□ 0.32
TPM1-205ENST00000357980 FBRSL1Q9HCM7 1045 aaKnown RBP17.07■□□□□ 0.32
TPM1-205ENST00000357980 THAP10Q9P2Z0 257 aaPredicted RBP17.07■□□□□ 0.32
TPM1-205ENST00000357980 EDDM13A0A1B0GTR0 161 aa17.06■□□□□ 0.32
TPM1-205ENST00000357980 ANTXRLA6NF34 631 aa17.06■□□□□ 0.32
TPM1-205ENST00000357980 CD3EAPO15446 510 aaKnown RBP17.06■□□□□ 0.32
TPM1-205ENST00000357980 HLA-EP13747 358 aa17.06■□□□□ 0.32
TPM1-205ENST00000357980 HADHAP40939 763 aa17.06■□□□□ 0.32
TPM1-205ENST00000357980 CD151P48509 253 aa17.06■□□□□ 0.32
TPM1-205ENST00000357980 GNGT1P63211 74 aa17.06■□□□□ 0.32
TPM1-205ENST00000357980 SEMA3AQ14563 771 aa17.06■□□□□ 0.32
TPM1-205ENST00000357980 CCDC85BQ15834 202 aaPredicted RBP17.06■□□□□ 0.32
TPM1-205ENST00000357980 ZNF789Q5FWF6 425 aa17.06■□□□□ 0.32
TPM1-205ENST00000357980 BPIFA1Q9NP55 256 aa17.06■□□□□ 0.32
TPM1-205ENST00000357980 FBXO6Q9NRD1 293 aaPredicted RBP17.06■□□□□ 0.32
TPM1-205ENST00000357980 SNX15Q9NRS6 342 aa17.06■□□□□ 0.32
TPM1-205ENST00000357980 CATSPERZQ9NTU4 200 aa17.06■□□□□ 0.32
TPM1-205ENST00000357980 NKIRAS1Q9NYS0 192 aa17.06■□□□□ 0.32
TPM1-205ENST00000357980 FKBPLQ9UIM3 349 aa17.06■□□□□ 0.32
TPM1-205ENST00000357980 PKP3Q9Y446 797 aa17.06■□□□□ 0.32
TPM1-205ENST00000357980 CKAP5Q14008 2032 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 HAUS5O94927 633 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 ZWINTO95229 277 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 S1PR4O95977 384 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 APODP05090 189 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 OGNP20774 298 aaKnown RBP17.05■□□□□ 0.32
TPM1-205ENST00000357980 FOXN2P32314 431 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 LSP1P33241 339 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 SERPINB8P50452 374 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 WDR4P57081 412 aaKnown RBP17.05■□□□□ 0.32
TPM1-205ENST00000357980 POLR2LP62875 67 aaKnown RBP17.05■□□□□ 0.32
TPM1-205ENST00000357980 TERF2Q15554 542 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 TYSND1Q2T9J0 566 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 MRNIPQ6NTE8 343 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 CNSTQ6PJW8 725 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 SERPINA13PQ6UXR4 307 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 CDHR3Q6ZTQ4 885 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 TPRG1Q6ZUI0 275 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 TSPAN33Q86UF1 283 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 PNPLA1Q8N8W4 532 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 MGARPQ8TDB4 240 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 HCAR2Q8TDS4 363 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 CSGALNACT1Q8TDX6 532 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 TRPV5Q9NQA5 729 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 PCMTD2Q9NV79 361 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 DKK3Q9UBP4 350 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 STARD13Q9Y3M8 1113 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 TM9SF1O15321 606 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 CLDN7O95471 211 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 LHCGRP22888 699 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 IL12RB1P42701 662 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 XIAPP98170 497 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 PEX6Q13608 980 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 PDE1CQ14123 709 aaPredicted RBP17.05■□□□□ 0.32
TPM1-205ENST00000357980 LRRC14Q15048 493 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 ZNF805Q5CZA5 627 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 EGFLAMQ63HQ2 1017 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 CRTC1Q6UUV9 634 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 CMC1Q7Z7K0 106 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 LDB1Q86U70 411 aaPredicted RBP17.05■□□□□ 0.32
TPM1-205ENST00000357980 NDUFAF2Q8N183 169 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 STK40Q8N2I9 435 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 OTUD6BQ8N6M0 293 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms