RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 HACD3Q9P035 362 aa14.88□□□□□ -0.03
CCNE1-202ENST00000357943 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.88□□□□□ -0.03
CCNE1-202ENST00000357943 KCTD3Q9Y597 815 aa14.88□□□□□ -0.03
CCNE1-202ENST00000357943 V9GYY5 206 aaPredicted RBP14.88□□□□□ -0.03
CCNE1-202ENST00000357943 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 SMAPO00193 183 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 AP3B1O00203 1094 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 NDC80O14777 642 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 MAP3K13O43283 966 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 LDB2O43679 373 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 BANF1O75531 89 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 FSBPO95073 299 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 PAK4O96013 591 aaPredicted RBP14.87□□□□□ -0.03
CCNE1-202ENST00000357943 IGHV4-34P06331 123 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 HMGCLP35914 325 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 ETV3P41162 512 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 CARSP49589 748 aaKnown RBP14.87□□□□□ -0.03
CCNE1-202ENST00000357943 STC1P52823 247 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 SEPT6Q14141 434 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 PTPRCAPQ14761 206 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 ZNF284Q2VY69 593 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 MSS51Q4VC12 460 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 TMC3Q7Z5M5 1100 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 TMEFF1Q8IYR6 380 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 TTC30BQ8N4P2 665 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 IFT81Q8WYA0 676 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 BIRC7Q96CA5 298 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 SRPK1Q96SB4 655 aaKnown RBP14.87□□□□□ -0.03
CCNE1-202ENST00000357943 EBF2Q9HAK2 575 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 BPIFA1Q9NP55 256 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 GDF3Q9NR23 364 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 ZDHHC18Q9NUE0 388 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 SYBUQ9NX95 663 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 BFARQ9NZS9 450 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 PCDHGA2Q9Y5H1 932 aa14.87□□□□□ -0.03
CCNE1-202ENST00000357943 CCDC78A2IDD5 438 aa14.86□□□□□ -0.03
CCNE1-202ENST00000357943 LZTS3O60299 673 aaPredicted RBP14.86□□□□□ -0.03
CCNE1-202ENST00000357943 TM7SF2O76062 418 aa14.86□□□□□ -0.03
CCNE1-202ENST00000357943 RECQL5O94762 991 aaPredicted RBP14.86□□□□□ -0.03
CCNE1-202ENST00000357943 NPY2RP49146 381 aa14.86□□□□□ -0.03
CCNE1-202ENST00000357943 ACOX1Q15067 660 aa14.86□□□□□ -0.03
CCNE1-202ENST00000357943 TAF1AQ15573 450 aaPredicted RBP14.86□□□□□ -0.03
CCNE1-202ENST00000357943 KIAA0895LQ68EN5 471 aa14.86□□□□□ -0.03
CCNE1-202ENST00000357943 Q6ZVL8 140 aa14.86□□□□□ -0.03
CCNE1-202ENST00000357943 TRIM69Q86WT6 500 aa14.86□□□□□ -0.03
CCNE1-202ENST00000357943 SLC41A1Q8IVJ1 513 aa14.86□□□□□ -0.03
CCNE1-202ENST00000357943 CADM4Q8NFZ8 388 aa14.86□□□□□ -0.03
CCNE1-202ENST00000357943 COQ10AQ96MF6 247 aa14.86□□□□□ -0.03
CCNE1-202ENST00000357943 ZNF778Q96MU6 729 aa14.86□□□□□ -0.03
CCNE1-202ENST00000357943 SLC17A9Q9BYT1 436 aa14.86□□□□□ -0.03
CCNE1-202ENST00000357943 IL22Q9GZX6 179 aa14.86□□□□□ -0.03
CCNE1-202ENST00000357943 ANKZF1Q9H8Y5 726 aa14.86□□□□□ -0.03
CCNE1-202ENST00000357943 CHRAC1Q9NRG0 131 aa14.86□□□□□ -0.03
CCNE1-202ENST00000357943 FAM114A2Q9NRY5 505 aa14.86□□□□□ -0.03
CCNE1-202ENST00000357943 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.86□□□□□ -0.03
CCNE1-202ENST00000357943 C2orf81A6NN90 581 aa14.85□□□□□ -0.03
CCNE1-202ENST00000357943 PSMD11O00231 422 aa14.85□□□□□ -0.03
CCNE1-202ENST00000357943 LATO43561 262 aa14.85□□□□□ -0.03
CCNE1-202ENST00000357943 LILRB5O75023 590 aa14.85□□□□□ -0.03
CCNE1-202ENST00000357943 CRTAMO95727 393 aa14.85□□□□□ -0.03
CCNE1-202ENST00000357943 ECHS1P30084 290 aa14.85□□□□□ -0.03
CCNE1-202ENST00000357943 SPINT3P49223 89 aa14.85□□□□□ -0.03
CCNE1-202ENST00000357943 DHX9Q08211 1270 aaKnown RBP14.85□□□□□ -0.03
CCNE1-202ENST00000357943 TCF15Q12870 199 aa14.85□□□□□ -0.03
CCNE1-202ENST00000357943 HIF1AQ16665 826 aa14.85□□□□□ -0.03
CCNE1-202ENST00000357943 TECPR1Q7Z6L1 1165 aa14.85□□□□□ -0.03
CCNE1-202ENST00000357943 PDIK1LQ8N165 341 aa14.85□□□□□ -0.03
CCNE1-202ENST00000357943 ZCCHC9Q8N567 271 aaKnown RBP14.85□□□□□ -0.03
CCNE1-202ENST00000357943 PRSS33Q8NF86 280 aa14.85□□□□□ -0.03
CCNE1-202ENST00000357943 OR13C4Q8NGS5 318 aa14.85□□□□□ -0.03
CCNE1-202ENST00000357943 SIGLEC10Q96LC7 697 aa14.85□□□□□ -0.03
CCNE1-202ENST00000357943 TRIM56Q9BRZ2 755 aaKnown RBP14.85□□□□□ -0.03
CCNE1-202ENST00000357943 C1QTNF2Q9BXJ5 285 aa14.85□□□□□ -0.03
CCNE1-202ENST00000357943 FRMD8Q9BZ67 464 aaPredicted RBP14.85□□□□□ -0.03
CCNE1-202ENST00000357943 FZD3Q9NPG1 666 aa14.85□□□□□ -0.03
CCNE1-202ENST00000357943 IL17CQ9P0M4 197 aa14.85□□□□□ -0.03
CCNE1-202ENST00000357943 CD84Q9UIB8 345 aa14.85□□□□□ -0.03
CCNE1-202ENST00000357943 TCAF1Q9Y4C2 921 aa14.85□□□□□ -0.03
CCNE1-202ENST00000357943 ABCA7Q8IZY2 2146 aa14.85□□□□□ -0.03
CCNE1-202ENST00000357943 HEATR9A2RTY3 570 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 MROH6A6NGR9 719 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 SDR42E2A6NKP2 422 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 METTL12A8MUP2 240 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 WNT9AO14904 365 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 SLC31A1O15431 190 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 PPFIA2O75334 1257 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 LPOP22079 712 aaPredicted RBP14.84□□□□□ -0.03
CCNE1-202ENST00000357943 ADRA1DP25100 572 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 CNR2P34972 360 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 PTGER3P43115 390 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 CCR5P51681 352 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 ZNF140P52738 457 aaPredicted RBP14.84□□□□□ -0.03
CCNE1-202ENST00000357943 ARL4CP56559 192 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 TUBB4BP68371 445 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 CREB5Q02930 508 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 CAV1Q03135 178 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 ERCC6LQ2NKX8 1250 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 BBS9Q3SYG4 887 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 PLK5Q496M5 336 aa14.84□□□□□ -0.03
CCNE1-202ENST00000357943 PCID2Q5JVF3 399 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms