RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 PTPN5P54829 565 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 MRPS22P82650 360 aaKnown RBP11.29□□□□□ -0.6
PSEN1-202ENST00000357710 CARTPTQ16568 116 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 SLC35G1Q2M3R5 365 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 IQCCQ4KMZ1 466 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 NBPF12Q5TAG4 269 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-202ENST00000357710 SLC6A19Q695T7 634 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 RTL10Q7L3V2 364 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 ZNF571Q7Z3V5 609 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-202ENST00000357710 SIAH1Q8IUQ4 282 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 ZCCHC9Q8N567 271 aaKnown RBP11.29□□□□□ -0.6
PSEN1-202ENST00000357710 RAET1EQ8TD07 263 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 PROX1Q92786 737 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 TRMT2BQ96GJ1 504 aaKnown RBP11.29□□□□□ -0.6
PSEN1-202ENST00000357710 UHRF1Q96T88 793 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-202ENST00000357710 KIFC3Q9BVG8 833 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 GTPBP2Q9BX10 602 aaKnown RBP11.29□□□□□ -0.6
PSEN1-202ENST00000357710 MROH8Q9H579 483 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 BMP2KQ9NSY1 1161 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-202ENST00000357710 FBXO5Q9UKT4 447 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 ZFR2Q9UPR6 939 aaKnown RBP11.29□□□□□ -0.6
PSEN1-202ENST00000357710 TMX2Q9Y320 296 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 FARP1Q9Y4F1 1045 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-202ENST00000357710 BCAS2O75934 225 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-202ENST00000357710 NDUFB10O96000 172 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 CCNE2O96020 404 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 CYP17A1P05093 508 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 DNAJB1P25685 340 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 RPS5P46782 204 aaKnown RBP11.29□□□□□ -0.6
PSEN1-202ENST00000357710 POU3F4P49335 361 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 PSMD4P55036 377 aaKnown RBP11.29□□□□□ -0.6
PSEN1-202ENST00000357710 PDK2Q15119 407 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 LDLRAP1Q5SW96 308 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 FAM109BQ6ICB4 259 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-202ENST00000357710 C16orf46Q6P387 395 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 USP51Q70EK9 711 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 KCTD1Q719H9 257 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 KRT74Q7RTS7 529 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 OR52K2Q8NGK3 314 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 GPKOWQ92917 476 aaPredicted RBP eCLIP11.29□□□□□ -0.6
PSEN1-202ENST00000357710 DUS3LQ96G46 650 aaKnown RBP11.29□□□□□ -0.6
PSEN1-202ENST00000357710 GANQ9H2C0 597 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 CPVLQ9H3G5 476 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 NCOR1P1Q9H4R4 102 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 CAB39LQ9H9S4 337 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 NECTIN3Q9NQS3 549 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 POLE4Q9NR33 117 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 BARHL2Q9NY43 387 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 CNTN3Q9P232 1028 aa11.29□□□□□ -0.6
PSEN1-202ENST00000357710 LOC390937A0A1W2PQ73 354 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 GLTPD2A6NH11 291 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 C2orf74A8MZ97 194 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 PLOD2O00469 737 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 TFECO14948 347 aaPredicted RBP11.28□□□□□ -0.6
PSEN1-202ENST00000357710 LRRN2O75325 713 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 CAPZA2P47755 286 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 RAB13P51153 203 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 SLC13A2Q13183 592 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 ZNF267Q14586 743 aaPredicted RBP11.28□□□□□ -0.6
PSEN1-202ENST00000357710 SUPT20HL1Q3ZLR7 823 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 Q5BKY6 102 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 EFHC2Q5JST6 749 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 BROXQ5VW32 411 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 MAMDC4Q6UXC1 1216 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 MAMDC2Q7Z304 686 aaPredicted RBP11.28□□□□□ -0.6
PSEN1-202ENST00000357710 IRF2BP2Q7Z5L9 587 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 ADAT2Q7Z6V5 191 aaKnown RBP11.28□□□□□ -0.6
PSEN1-202ENST00000357710 TCTE3Q8IZS6 198 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 ANKFN1Q8N957 763 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 TP53I13Q8NBR0 393 aaPredicted RBP11.28□□□□□ -0.6
PSEN1-202ENST00000357710 URGCPQ8TCY9 931 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 DNAJA4Q8WW22 397 aaPredicted RBP11.28□□□□□ -0.6
PSEN1-202ENST00000357710 RILPQ96NA2 401 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 PIGSQ96S52 555 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 KCTD14Q9BQ13 255 aaPredicted RBP11.28□□□□□ -0.6
PSEN1-202ENST00000357710 ZSWIM1Q9BR11 485 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 SNX15Q9NRS6 342 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 PTPN22Q9Y2R2 807 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 HSPE1-MOB4S4R3N1 261 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 WDR90Q96KV7 1748 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 RAB19A4D1S5 217 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 PRSS47A8MTI9 375 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 FZD6O60353 706 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 SNX4O95219 450 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 FABP1P07148 127 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 CHRNB2P17787 502 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 IVDP26440 423 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 TRHRP34981 398 aaPredicted RBP11.28□□□□□ -0.6
PSEN1-202ENST00000357710 ETV4P43268 484 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 PSMC5P62195 406 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 NR5A1Q13285 461 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 KCNJ11Q14654 390 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 ZYXQ15942 572 aaKnown RBP11.28□□□□□ -0.6
PSEN1-202ENST00000357710 UBE2SQ16763 222 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 SPATS1Q496A3 300 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 SETMARQ53H47 684 aaPredicted RBP11.28□□□□□ -0.6
PSEN1-202ENST00000357710 KRT79Q5XKE5 535 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 TRIM72Q6ZMU5 477 aa11.28□□□□□ -0.6
PSEN1-202ENST00000357710 SLC13A5Q86YT5 568 aaPredicted RBP11.28□□□□□ -0.6
PSEN1-202ENST00000357710 MIB1Q86YT6 1006 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms