RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 STC1P52823 247 aa25.39■■□□□ 1.66
SSBP3-202ENST00000357475 TAF1AQ15573 450 aaPredicted RBP25.39■■□□□ 1.66
SSBP3-202ENST00000357475 UBAP2Q5T6F2 1119 aaKnown RBP25.39■■□□□ 1.66
SSBP3-202ENST00000357475 CBARPQ8N350 705 aaPredicted RBP25.39■■□□□ 1.66
SSBP3-202ENST00000357475 MYRIPQ8NFW9 859 aa25.39■■□□□ 1.66
SSBP3-202ENST00000357475 KLK6Q92876 244 aa25.39■■□□□ 1.66
SSBP3-202ENST00000357475 RANBP9Q96S59 729 aa25.39■■□□□ 1.66
SSBP3-202ENST00000357475 PLAC1Q9HBJ0 212 aa25.39■■□□□ 1.66
SSBP3-202ENST00000357475 HACD3Q9P035 362 aa25.39■■□□□ 1.66
SSBP3-202ENST00000357475 MAD1L1Q9Y6D9 718 aa25.39■■□□□ 1.66
SSBP3-202ENST00000357475 TEX264Q9Y6I9 313 aa25.39■■□□□ 1.66
SSBP3-202ENST00000357475 PLXNA2O75051 1894 aa25.39■■□□□ 1.66
SSBP3-202ENST00000357475 ZNF106Q9H2Y7 1883 aaKnown RBP25.39■■□□□ 1.66
SSBP3-202ENST00000357475 CEP192Q8TEP8 1941 aa25.39■■□□□ 1.66
SSBP3-202ENST00000357475 TBC1D3DA0A087WVF3 549 aa25.38■■□□□ 1.65
SSBP3-202ENST00000357475 TBC1D3IA0A087WXS9 549 aa25.38■■□□□ 1.65
SSBP3-202ENST00000357475 TBC1D3EA0A087X179 549 aa25.38■■□□□ 1.65
SSBP3-202ENST00000357475 TBC1D3KA0A087X1G2 549 aa25.38■■□□□ 1.65
SSBP3-202ENST00000357475 TBC1D3FA6NER0 549 aaPredicted RBP25.38■■□□□ 1.65
SSBP3-202ENST00000357475 IGLON5A6NGN9 336 aa25.38■■□□□ 1.65
SSBP3-202ENST00000357475 TBC1D3LB9A6J9 549 aa25.38■■□□□ 1.65
SSBP3-202ENST00000357475 AP3B1O00203 1094 aa25.38■■□□□ 1.65
SSBP3-202ENST00000357475 RNGTTO60942 597 aaKnown RBP25.38■■□□□ 1.65
SSBP3-202ENST00000357475 SEMA4FO95754 770 aa25.38■■□□□ 1.65
SSBP3-202ENST00000357475 ELFN1P0C7U0 828 aa25.38■■□□□ 1.65
SSBP3-202ENST00000357475 TBC1D3HP0C7X1 549 aa25.38■■□□□ 1.65
SSBP3-202ENST00000357475 C6P13671 934 aa25.38■■□□□ 1.65
SSBP3-202ENST00000357475 ADRA1DP25100 572 aa25.38■■□□□ 1.65
SSBP3-202ENST00000357475 NMBRP28336 390 aa25.38■■□□□ 1.65
SSBP3-202ENST00000357475 TMPRSS15P98073 1019 aa25.38■■□□□ 1.65
SSBP3-202ENST00000357475 CCDC15Q0P6D6 951 aa25.38■■□□□ 1.65
SSBP3-202ENST00000357475 SRSF5Q13243 272 aaKnown RBP25.38■■□□□ 1.65
SSBP3-202ENST00000357475 ARHGEF7Q14155 803 aa25.38■■□□□ 1.65
SSBP3-202ENST00000357475 FGL2Q14314 439 aa25.38■■□□□ 1.65
SSBP3-202ENST00000357475 DNAJC21Q5F1R6 531 aaKnown RBP25.38■■□□□ 1.65
SSBP3-202ENST00000357475 PCID2Q5JVF3 399 aa25.38■■□□□ 1.65
SSBP3-202ENST00000357475 TBC1D3GQ6DHY5 549 aa25.38■■□□□ 1.65
SSBP3-202ENST00000357475 TBC1D3CQ6IPX1 549 aa25.38■■□□□ 1.65
SSBP3-202ENST00000357475 WDR93Q6P2C0 686 aa25.38■■□□□ 1.65
SSBP3-202ENST00000357475 ZBED8Q8IZ13 594 aa25.38■■□□□ 1.65
SSBP3-202ENST00000357475 TBC1D3Q8IZP1 549 aaPredicted RBP25.38■■□□□ 1.65
SSBP3-202ENST00000357475 PPHLN1Q8NEY8 458 aaKnown RBP25.38■■□□□ 1.65
SSBP3-202ENST00000357475 CXorf40AQ8TE69 158 aa25.38■■□□□ 1.65
SSBP3-202ENST00000357475 TRABDQ9H4I3 376 aa25.38■■□□□ 1.65
SSBP3-202ENST00000357475 C6orf106Q9H6K1 298 aaPredicted RBP25.38■■□□□ 1.65
SSBP3-202ENST00000357475 SGK2Q9HBY8 427 aa25.38■■□□□ 1.65
SSBP3-202ENST00000357475 MTRF1LQ9UGC7 380 aaKnown RBP25.38■■□□□ 1.65
SSBP3-202ENST00000357475 A0A1W2PQU0 124 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 PRR33A8MZF0 331 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 CTIFO43310 598 aaKnown RBP25.37■■□□□ 1.65
SSBP3-202ENST00000357475 TSPAN6O43657 245 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 BCKDHBP21953 392 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 ETV3P41162 512 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 SFSWAPQ12872 951 aaKnown RBP25.37■■□□□ 1.65
SSBP3-202ENST00000357475 CENPUQ71F23 418 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 DEFB119Q8N690 84 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 FBXO36Q8NEA4 188 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 OR4K2Q8NGD2 314 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 RUBCNQ92622 972 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 MFSD3Q96ES6 412 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 STAMBPL1Q96FJ0 436 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 DNAJC1Q96KC8 554 aaKnown RBP25.37■■□□□ 1.65
SSBP3-202ENST00000357475 FCRL3Q96P31 734 aaPredicted RBP25.37■■□□□ 1.65
SSBP3-202ENST00000357475 KIFC1Q9BW19 673 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 GPR174Q9BXC1 333 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 FAM129AQ9BZQ8 928 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 IL17CQ9P0M4 197 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 CD84Q9UIB8 345 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 SOX13Q9UN79 622 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 ABCA7Q8IZY2 2146 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 ZNF318Q5VUA4 2279 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 HEATR9A2RTY3 570 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 C10orf142B7Z368 130 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 CRTAMO95727 393 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 OXTRP30559 389 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 MAT2AP31153 395 aaKnown RBP25.37■■□□□ 1.65
SSBP3-202ENST00000357475 HMGCLP35914 325 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 CBLBQ13191 982 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 SMAD1Q15797 465 aaKnown RBP25.37■■□□□ 1.65
SSBP3-202ENST00000357475 ESRP1Q6NXG1 681 aaKnown RBP25.37■■□□□ 1.65
SSBP3-202ENST00000357475 Q6ZVL8 140 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 OR13J1Q8NGT2 312 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 OR2T34Q8NGX1 318 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 C9orf72Q96LT7 481 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 COQ10AQ96MF6 247 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 EBNA1BP2Q99848 306 aaKnown RBP25.37■■□□□ 1.65
SSBP3-202ENST00000357475 PREBQ9HCU5 417 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 RAB21Q9UL25 225 aa25.37■■□□□ 1.65
SSBP3-202ENST00000357475 H0Y858 1186 aa25.36■■□□□ 1.65
SSBP3-202ENST00000357475 ZNF30P17039 623 aa25.36■■□□□ 1.65
SSBP3-202ENST00000357475 LPOP22079 712 aaPredicted RBP25.36■■□□□ 1.65
SSBP3-202ENST00000357475 NFKBIAP25963 317 aa25.36■■□□□ 1.65
SSBP3-202ENST00000357475 ARSDP51689 593 aa25.36■■□□□ 1.65
SSBP3-202ENST00000357475 ACOX1Q15067 660 aa25.36■■□□□ 1.65
SSBP3-202ENST00000357475 TMEM259Q4ZIN3 620 aa25.36■■□□□ 1.65
SSBP3-202ENST00000357475 TSTD2Q5T7W7 516 aa25.36■■□□□ 1.65
SSBP3-202ENST00000357475 WDR5BQ86VZ2 330 aa25.36■■□□□ 1.65
SSBP3-202ENST00000357475 CFAP36Q96G28 342 aa25.36■■□□□ 1.65
SSBP3-202ENST00000357475 SRPK1Q96SB4 655 aaKnown RBP25.36■■□□□ 1.65
SSBP3-202ENST00000357475 FBXO4Q9UKT5 387 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms