RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 SLC22A15Q8IZD6 547 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 PNPLA1Q8N8W4 532 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 REPS1Q96D71 796 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 WDR77Q9BQA1 342 aaPredicted RBP7.36□□□□□ -1.23
VPS13A-202ENST00000357409 ZNF222Q9UK12 451 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 SYNMO15061 1565 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 CCT8L1PA6NM43 557 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 PLK4O00444 970 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 CSH1P0DML2 217 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 CSH2P0DML3 217 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 SMPD1P17405 629 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 MAPKAPK3Q16644 382 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 CYP2A13Q16696 494 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 SUGP1Q8IWZ8 645 aaKnown RBP7.36□□□□□ -1.23
VPS13A-202ENST00000357409 SLAIN1Q8ND83 568 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 NOD2Q9HC29 1040 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 KRCC1Q9NPI7 259 aaPredicted RBP7.36□□□□□ -1.23
VPS13A-202ENST00000357409 TCF7L2Q9NQB0 619 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 ARHGEF4Q9NR80 690 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 PTCH2Q9Y6C5 1203 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 GRXCR1A8MXD5 290 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 TK2O00142 265 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 B4GALT2O60909 372 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 CST1P01037 141 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 CATP04040 527 aaKnown RBP7.36□□□□□ -1.23
VPS13A-202ENST00000357409 BMP1P13497 986 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 HGFP14210 728 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 PPM1AP35813 382 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 PRPF38BQ5VTL8 546 aaKnown RBP7.36□□□□□ -1.23
VPS13A-202ENST00000357409 FUT10Q6P4F1 479 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 OR5AK3PQ8NH89 298 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 CCSER2Q9H7U1 834 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 COL5A2P05997 1499 aaPredicted RBP7.36□□□□□ -1.23
VPS13A-202ENST00000357409 RGS20O76081 388 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 LRPAP1P30533 357 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 HK2P52789 917 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 RTP1P59025 263 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 SLC13A2Q13183 592 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 LAMB3Q13751 1172 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 UBXN11Q5T124 520 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 KRT74Q7RTS7 529 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 CPNE8Q86YQ8 564 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 KREMEN2Q8NCW0 462 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 KCNK6Q9Y257 313 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 PLGP00747 810 aaPredicted RBP7.36□□□□□ -1.23
VPS13A-202ENST00000357409 RHBDL3P58872 404 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 TSEN2Q8NCE0 465 aaKnown RBP7.36□□□□□ -1.23
VPS13A-202ENST00000357409 LNX1Q8TBB1 728 aaPredicted RBP7.36□□□□□ -1.23
VPS13A-202ENST00000357409 ZNF398Q8TD17 642 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 IDI2Q9BXS1 227 aa7.36□□□□□ -1.23
VPS13A-202ENST00000357409 MRPL9Q9BYD2 267 aaKnown RBP7.36□□□□□ -1.23
VPS13A-202ENST00000357409 LTA4HP09960 611 aaKnown RBP7.35□□□□□ -1.23
VPS13A-202ENST00000357409 NNATQ16517 81 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 TATDN1Q6P1N9 297 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 SPESP1Q6UW49 350 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 SYDE1Q6ZW31 735 aaPredicted RBP7.35□□□□□ -1.23
VPS13A-202ENST00000357409 ZNF276Q8N554 614 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 OR4E2Q8NGC2 313 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 RNF157Q96PX1 679 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 C2orf49Q9BVC5 232 aaPredicted RBP7.35□□□□□ -1.23
VPS13A-202ENST00000357409 OR51B6Q9H340 312 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 SLC27A6Q9Y2P4 619 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 H3BQ06 376 aaPredicted RBP7.35□□□□□ -1.23
VPS13A-202ENST00000357409 MUTP22033 750 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 SMAD2Q15796 467 aaKnown RBP7.35□□□□□ -1.23
VPS13A-202ENST00000357409 C1orf189Q5VU69 101 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 NEPROQ6NW34 567 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 TMEM145Q8NBT3 493 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 OR13C4Q8NGS5 318 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 BADQ92934 168 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 MOCOSQ96EN8 888 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 SLCO1B3Q9NPD5 702 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 KIAA1522Q9P206 1035 aaPredicted RBP7.35□□□□□ -1.23
VPS13A-202ENST00000357409 HMGXB3Q12766 1538 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 A0A0U1RQS6 177 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 CCDC189A1A4V9 331 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 PIK3CDO00329 1044 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 ERN1O75460 977 aaKnown RBP7.35□□□□□ -1.23
VPS13A-202ENST00000357409 RPN2P04844 631 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 PRKAR1AP10644 381 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 HNRNPH1P31943 449 aaKnown RBP7.35□□□□□ -1.23
VPS13A-202ENST00000357409 RGS1Q08116 209 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 ELAVL2Q12926 359 aaKnown RBP7.35□□□□□ -1.23
VPS13A-202ENST00000357409 TLR1Q15399 786 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 FAM83AQ86UY5 434 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 GPR65Q8IYL9 337 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 SIDT2Q8NBJ9 832 aaKnown RBP7.35□□□□□ -1.23
VPS13A-202ENST00000357409 P2RY11Q96G91 374 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 SEC61A2Q9H9S3 476 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 BLOC1S4Q9NUP1 217 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 PLEKHG2Q9H7P9 1386 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 EIF2AK4Q9P2K8 1649 aaKnown RBP7.35□□□□□ -1.23
VPS13A-202ENST00000357409 SOWAHBA6NEL2 793 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 SIM2Q14190 667 aaPredicted RBP7.35□□□□□ -1.23
VPS13A-202ENST00000357409 AASDHQ4L235 1098 aaPredicted RBP7.35□□□□□ -1.23
VPS13A-202ENST00000357409 LPCAT4Q643R3 524 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 SUSD1Q6UWL2 747 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 EIF3MQ7L2H7 374 aaKnown RBP7.35□□□□□ -1.23
VPS13A-202ENST00000357409 UBQLNLQ8IYU4 475 aa7.35□□□□□ -1.23
VPS13A-202ENST00000357409 CMTM8Q8IZV2 173 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms