RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 CTBSQ01459 385 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 IFITM2Q01629 132 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 NEDD8Q15843 81 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 FBXO48Q5FWF7 155 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 GPR107Q5VW38 600 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 NAPEPLDQ6IQ20 393 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 ARHGAP36Q6ZRI8 547 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 CHSY3Q70JA7 882 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 IGFN1Q86VF2 1251 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 TMEM151AQ8N4L1 468 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 Q8N9G6 341 aaPredicted RBP8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 B3GALNT2Q8NCR0 500 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 LRCH3Q96II8 777 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 COG8Q96MW5 612 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 FICDQ9BVA6 458 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 UNC93B1Q9H1C4 597 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 ELP3Q9H9T3 547 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 OLAHQ9NV23 265 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 PIM2Q9P1W9 311 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 ANKMY1Q9P2S6 941 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 OR12D3Q9UGF7 316 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 GJD2Q9UKL4 321 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 DSEQ9UL01 958 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 PTGDR2Q9Y5Y4 395 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 A0A087WXM4 84 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 ZNF487B1APH4 448 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 I6L893 689 aaPredicted RBP8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 DCLK1O15075 740 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 ICMTO60725 284 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 SNRPB2P08579 225 aaKnown RBP8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 SLC1A2P43004 574 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 CHRNA4P43681 627 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 SLC26A2P50443 739 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 ZNF280AP59817 542 aaPredicted RBP8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 STX1BP61266 288 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 CCDC58Q4VC31 144 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 RBM20Q5T481 1227 aaKnown RBP8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 TWF2Q6IBS0 349 aaKnown RBP8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 ANKRD26P1Q6NSI1 321 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 GALNT18Q6P9A2 607 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 TMC5Q6UXY8 1006 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 LYSMD3Q7Z3D4 306 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 CUZD1Q86UP6 607 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 ZNF354CQ86Y25 554 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 MFSD6LQ8IWD5 586 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 SLC38A6Q8IZM9 456 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 FIBCD1Q8N539 461 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 ZNF420Q8TAQ5 688 aaPredicted RBP8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 SPPL2BQ8TCT7 592 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 EGLN2Q96KS0 407 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 C1QTNF1Q9BXJ1 281 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 TKTL2Q9H0I9 626 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 TP63Q9H3D4 680 aaPredicted RBP8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 RIC8BQ9NVN3 520 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 SLC8A2Q9UPR5 921 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 PIN4Q9Y237 131 aaKnown RBP8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 CSADQ9Y600 493 aa8.26□□□□□ -1.09
CDC42SE1-201ENST00000357235 ILVBLA1L0T0 632 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 H3BRB1 525 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 TMCC2O75069 709 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 CHRM3P20309 590 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 IGFBP6P24592 240 aaPredicted RBP8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 NPY2RP49146 381 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 TXNL4AP83876 142 aaKnown RBP8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 ITKQ08881 620 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 TRAF2Q12933 501 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 CBLBQ13191 982 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 DPYSQ14117 519 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 PLCL1Q15111 1095 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 RPS6KA2Q15349 733 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 GPR162Q16538 588 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 FUT11Q495W5 492 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 AARS2Q5JTZ9 985 aaKnown RBP8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 HABP4Q5JVS0 413 aaKnown RBP8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 PERM1Q5SV97 790 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 TSTD2Q5T7W7 516 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 AGAP7PQ5VUJ5 663 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 OTUD1Q5VV17 481 aaPredicted RBP8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 ARHGAP17Q68EM7 881 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 UNC93AQ86WB7 457 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 DDIASQ8IXT1 998 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 AFAP1L2Q8N4X5 818 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 SLCO4A1Q96BD0 722 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 FBXL20Q96IG2 436 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 TNIP3Q96KP6 325 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 HSFY1Q96LI6 401 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 ZNF597Q96LX8 424 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 ZNF641Q96N77 438 aaPredicted RBP8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 C17orf80Q9BSJ5 609 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 C1orf50Q9BV19 199 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 OSBPL2Q9H1P3 480 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 RNF39Q9H2S5 420 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 WDCPQ9H6R7 721 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 ZNF112Q9UJU3 913 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 ANKRD6Q9Y2G4 727 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 PHIPQ8WWQ0 1821 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 MAGEB16A2A368 324 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 RGS13O14921 159 aa8.25□□□□□ -1.09
CDC42SE1-201ENST00000357235 NRP2O60462 931 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms