RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 PDXPQ96GD0 296 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 LIN37Q96GY3 246 aaPredicted RBP10.68□□□□□ -0.7
CAPN3-204ENST00000356316 NUDCD1Q96RS6 583 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 MRPL40Q9NQ50 206 aaKnown RBP10.68□□□□□ -0.7
CAPN3-204ENST00000356316 PHPT1Q9NRX4 125 aaPredicted RBP10.68□□□□□ -0.7
CAPN3-204ENST00000356316 GOLGA6AQ9NYA3 693 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 LRIT1Q9P2V4 623 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 B4GALT6Q9UBX8 382 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 PCDHGA4Q9Y5G9 962 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 MGAQ8IWI9 3026 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 RP1P56715 2156 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 CDRT15L2A8MXV6 281 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 B4DGG1 531 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 MYO1FO00160 1098 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 RARAP10276 462 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 MYCLP1P12525 358 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-204ENST00000356316 VIPR1P32241 457 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 MMP13P45452 471 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 CFHR1Q03591 330 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 HADHQ16836 314 aaKnown RBP10.67□□□□□ -0.7
CAPN3-204ENST00000356316 ZSCAN23Q3MJ62 389 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 C14orf28Q4W4Y0 310 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 RALGPS1Q5JS13 557 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 ARMC12Q5T9G4 340 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 OGFOD3Q6PK18 319 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 CYP4V2Q6ZWL3 525 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-204ENST00000356316 CCNJLQ8IV13 435 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 GPR156Q8NFN8 814 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 CPLX3Q8WVH0 158 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 TEKT4Q8WW24 435 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 SYN2Q92777 582 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-204ENST00000356316 TMEM159Q96B96 161 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 WBP1Q96G27 269 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 PRR11Q96HE9 360 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-204ENST00000356316 CSPG4P5Q96PW8 444 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 LGR4Q9BXB1 951 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 GSDMCQ9BYG8 508 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 FOXP3Q9BZS1 431 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 TMEM168Q9H0V1 697 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 SUDS3Q9H7L9 328 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-204ENST00000356316 CARS2Q9HA77 564 aaKnown RBP10.67□□□□□ -0.7
CAPN3-204ENST00000356316 NOD2Q9HC29 1040 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 FGF22Q9HCT0 170 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 AKAP7Q9P0M2 348 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-204ENST00000356316 RABGEF1Q9UJ41 708 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 ANAPC7Q9UJX3 599 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 APPL1Q9UKG1 709 aa10.67□□□□□ -0.7
CAPN3-204ENST00000356316 LRP4O75096 1905 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 GCN1Q92616 2671 aaKnown RBP10.66□□□□□ -0.7
CAPN3-204ENST00000356316 A0A1W2PNU3 283 aaPredicted RBP10.66□□□□□ -0.7
CAPN3-204ENST00000356316 PRSS38A1L453 326 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 RHPN2P1A8MT19 583 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 D6RAR5 112 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 GOLGA6L19H0YKK7 550 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 HTRA2O43464 458 aaPredicted RBP10.66□□□□□ -0.7
CAPN3-204ENST00000356316 NUDT21O43809 227 aaKnown RBP10.66□□□□□ -0.7
CAPN3-204ENST00000356316 MAFKO60675 156 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 SERPING1P05155 500 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 CES1P23141 567 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 IL1R2P27930 398 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 CCKBRP32239 447 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 UGT1A5P35504 534 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 EMP3P54852 163 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 UBASH3AP57075 661 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 ILF3Q12906 894 aaKnown RBP eCLIP10.66□□□□□ -0.7
CAPN3-204ENST00000356316 CNGA3Q16281 694 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 CERCAMQ5T4B2 595 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 SPECC1LQ69YQ0 1117 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 NYAP1Q6ZVC0 841 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 USP45Q70EL2 814 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 B3GNT8Q7Z7M8 397 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 CLEC14AQ86T13 490 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 PIM3Q86V86 326 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 LRRC49Q8IUZ0 686 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 TP53INP2Q8IXH6 220 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 IQCDQ96DY2 449 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 SCRN2Q96FV2 425 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 COQ10AQ96MF6 247 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 CMKLR1Q99788 373 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 NUP85Q9BW27 656 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 TEX101Q9BY14 249 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 THAP2Q9H0W7 228 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 PCDH18Q9HCL0 1135 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 ETNK2Q9NVF9 386 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 SEPT10Q9P0V9 454 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 PCDHB11Q9Y5F2 797 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 PCDHGA7Q9Y5G6 932 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 RNF215Q9Y6U7 377 aa10.66□□□□□ -0.7
CAPN3-204ENST00000356316 A0A1W2PQJ5 194 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 A0A1W2PQM1 296 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 PSMD11O00231 422 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 CASC3O15234 703 aaKnown RBP10.65□□□□□ -0.7
CAPN3-204ENST00000356316 HEXIM1O94992 359 aaKnown RBP10.65□□□□□ -0.7
CAPN3-204ENST00000356316 CCNB1P14635 433 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 CTPS1P17812 591 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 CR2P20023 1033 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 ALDH4A1P30038 563 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 SLC5A2P31639 672 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 ETV3P41162 512 aa10.65□□□□□ -0.7
CAPN3-204ENST00000356316 GPR1P46091 355 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms