RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 ALDH16A1Q8IZ83 802 aa10.15□□□□□ -0.78
PTPRA-203ENST00000356147 PDZD8Q8NEN9 1154 aa10.15□□□□□ -0.78
PTPRA-203ENST00000356147 TRPC4APQ8TEL6 797 aa10.15□□□□□ -0.78
PTPRA-203ENST00000356147 NT5C3BQ969T7 300 aa10.15□□□□□ -0.78
PTPRA-203ENST00000356147 ACDQ96AP0 544 aa10.15□□□□□ -0.78
PTPRA-203ENST00000356147 MUS81Q96NY9 551 aa10.15□□□□□ -0.78
PTPRA-203ENST00000356147 PPP1R10Q96QC0 940 aaKnown RBP10.15□□□□□ -0.78
PTPRA-203ENST00000356147 HBEGFQ99075 208 aa10.15□□□□□ -0.78
PTPRA-203ENST00000356147 C1orf50Q9BV19 199 aa10.15□□□□□ -0.78
PTPRA-203ENST00000356147 DGCR6LQ9BY27 220 aa10.15□□□□□ -0.78
PTPRA-203ENST00000356147 MPP6Q9NZW5 540 aa10.15□□□□□ -0.78
PTPRA-203ENST00000356147 IFT80Q9P2H3 777 aaPredicted RBP10.15□□□□□ -0.78
PTPRA-203ENST00000356147 SLC27A5Q9Y2P5 690 aa10.15□□□□□ -0.78
PTPRA-203ENST00000356147 ST14Q9Y5Y6 855 aa10.15□□□□□ -0.78
PTPRA-203ENST00000356147 PSME4Q14997 1843 aa10.15□□□□□ -0.78
PTPRA-203ENST00000356147 KANSL1LA0AUZ9 987 aa10.15□□□□□ -0.79
PTPRA-203ENST00000356147 NCF1BA6NI72 391 aaPredicted RBP10.15□□□□□ -0.79
PTPRA-203ENST00000356147 NCF1CA8MVU1 366 aaPredicted RBP10.15□□□□□ -0.79
PTPRA-203ENST00000356147 ADM5C9JUS6 153 aa10.15□□□□□ -0.79
PTPRA-203ENST00000356147 H0YJX3 145 aa10.15□□□□□ -0.79
PTPRA-203ENST00000356147 MSI1O43347 362 aaKnown RBP10.15□□□□□ -0.79
PTPRA-203ENST00000356147 SERPINB7O75635 380 aa10.15□□□□□ -0.79
PTPRA-203ENST00000356147 RSL1D1O76021 490 aaKnown RBP10.15□□□□□ -0.79
PTPRA-203ENST00000356147 HLA-DQB2P05538 268 aa10.15□□□□□ -0.79
PTPRA-203ENST00000356147 PIRTP0C851 137 aa10.15□□□□□ -0.79
PTPRA-203ENST00000356147 NCF1P14598 390 aaPredicted RBP10.15□□□□□ -0.79
PTPRA-203ENST00000356147 SLC6A2P23975 617 aa10.15□□□□□ -0.79
PTPRA-203ENST00000356147 LILRA4P59901 499 aa10.15□□□□□ -0.79
PTPRA-203ENST00000356147 PHEXP78562 749 aa10.15□□□□□ -0.79
PTPRA-203ENST00000356147 SEMA3BQ13214 749 aa10.15□□□□□ -0.79
PTPRA-203ENST00000356147 GRIK4Q16099 956 aa10.15□□□□□ -0.79
PTPRA-203ENST00000356147 PFKFB4Q16877 469 aa10.15□□□□□ -0.79
PTPRA-203ENST00000356147 ZNF829Q3KNS6 432 aaPredicted RBP10.15□□□□□ -0.79
PTPRA-203ENST00000356147 ZNF484Q5JVG2 852 aa10.15□□□□□ -0.79
PTPRA-203ENST00000356147 MARCH8Q5T0T0 291 aa10.15□□□□□ -0.79
PTPRA-203ENST00000356147 ARRDC4Q8NCT1 418 aa10.15□□□□□ -0.79
PTPRA-203ENST00000356147 BORCS5Q969J3 196 aa10.15□□□□□ -0.79
PTPRA-203ENST00000356147 PTERQ96BW5 349 aa10.15□□□□□ -0.79
PTPRA-203ENST00000356147 RNF145Q96MT1 663 aa10.15□□□□□ -0.79
PTPRA-203ENST00000356147 NFKBIZQ9BYH8 718 aa10.15□□□□□ -0.79
PTPRA-203ENST00000356147 RBM22Q9NW64 420 aaKnown RBP eCLIP10.15□□□□□ -0.79
PTPRA-203ENST00000356147 MARCH4Q9P2E8 410 aaPredicted RBP10.15□□□□□ -0.79
PTPRA-203ENST00000356147 WARS2Q9UGM6 360 aaKnown RBP10.15□□□□□ -0.79
PTPRA-203ENST00000356147 TSR3Q9UJK0 312 aaKnown RBP10.15□□□□□ -0.79
PTPRA-203ENST00000356147 TRHDEQ9UKU6 1024 aa10.15□□□□□ -0.79
PTPRA-203ENST00000356147 TCAF1Q9Y4C2 921 aa10.15□□□□□ -0.79
PTPRA-203ENST00000356147 TMEM221A6NGB7 291 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 UBXN8O00124 270 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 XYLBO75191 536 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 USP2O75604 605 aaPredicted RBP10.14□□□□□ -0.79
PTPRA-203ENST00000356147 GJB3O75712 270 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 CNMDO75829 334 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 PRSS56P0CW18 603 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 HGFP14210 728 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 HADHAP40939 763 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 PSMD8P48556 350 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 TAF6P49848 677 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 ARSDP51689 593 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 HK2P52789 917 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 NFATC3Q12968 1075 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 INPP5AQ14642 412 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 CYBRD1Q53TN4 286 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 ABRAXAS1Q6UWZ7 409 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 ERO1BQ86YB8 467 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 ATPAF2Q8N5M1 289 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 LRRC52Q8N7C0 313 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 PTGR2Q8N8N7 351 aaPredicted RBP10.14□□□□□ -0.79
PTPRA-203ENST00000356147 PCYOX1LQ8NBM8 494 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 TMEM40Q8WWA1 233 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 KLHL5Q96PQ7 755 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 SMOQ99835 787 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 YIPF2Q9BWQ6 316 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 EML4Q9HC35 981 aaKnown RBP10.14□□□□□ -0.79
PTPRA-203ENST00000356147 MRPL40Q9NQ50 206 aaKnown RBP10.14□□□□□ -0.79
PTPRA-203ENST00000356147 CRTAC1Q9NQ79 661 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 ARMC1Q9NVT9 282 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 ZNHIT2Q9UHR6 403 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 SARDHQ9UL12 918 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 NDUFAF1Q9Y375 327 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 DOCK1Q14185 1865 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 ERI2A8K979 691 aaKnown RBP10.14□□□□□ -0.79
PTPRA-203ENST00000356147 PIRO00625 290 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 AXIN1O15169 862 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 LTA4HP09960 611 aaKnown RBP10.14□□□□□ -0.79
PTPRA-203ENST00000356147 ALDH4A1P30038 563 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 SHMT2P34897 504 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 HALP42357 657 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 RPS9P46781 194 aaKnown RBP10.14□□□□□ -0.79
PTPRA-203ENST00000356147 GSK3BP49841 420 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 SLC26A2P50443 739 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 CCT8P50990 548 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 BCAP31P51572 246 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 DAOAP59103 153 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 LSM3P62310 102 aaKnown RBP10.14□□□□□ -0.79
PTPRA-203ENST00000356147 AAK1Q2M2I8 961 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 UNC50Q53HI1 259 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 PAGE3Q5JUK9 113 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 HECTD2Q5U5R9 776 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 AGAP9Q5VTM2 703 aa10.14□□□□□ -0.79
PTPRA-203ENST00000356147 FAM45BPQ6NSW5 357 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms