RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 AUTS2Q8WXX7 1259 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 BOCQ9BWV1 1114 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 ZNF385DQ9H6B1 395 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 RHBDL2Q9NX52 303 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 ZMIZ1Q9ULJ6 1067 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 GOT2P00505 430 aaKnown RBP5.66□□□□□ -1.5
CD47-201ENST00000355354 KRT1P04264 644 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 SHMT2P34897 504 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 LILRA4P59901 499 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 EIF3EP60228 445 aaKnown RBP5.66□□□□□ -1.5
CD47-201ENST00000355354 ACTR3P61158 418 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 GCNT1Q02742 428 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 PDCD2Q16342 344 aaPredicted RBP5.66□□□□□ -1.5
CD47-201ENST00000355354 CCSMST1Q4G0I0 132 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 PRSS36Q5K4E3 855 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 ANKS4BQ8N8V4 417 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 APBB2Q92870 758 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 CATSPER2Q96P56 530 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 OLFM3Q96PB7 478 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 BBS2Q9BXC9 721 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 CCDC167Q9P0B6 97 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 MAD1L1Q9Y6D9 718 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 OTOL1A6NHN0 477 aaPredicted RBP5.66□□□□□ -1.5
CD47-201ENST00000355354 ARNTLO00327 626 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 NME4O00746 187 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 TBX3O15119 743 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 TSPAN1O60635 241 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 TIPRLO75663 272 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 SUPT20HL2P0C7V6 817 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 EIF4EBP2Q13542 120 aaPredicted RBP5.66□□□□□ -1.5
CD47-201ENST00000355354 PTGR1Q14914 329 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 KLC3Q6P597 504 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 SPATC1Q76KD6 591 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 TECPR1Q7Z6L1 1165 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 PCNPQ8WW12 178 aaKnown RBP5.66□□□□□ -1.5
CD47-201ENST00000355354 LRTOMTQ8WZ04 291 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 PCED1BQ96HM7 432 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 TMEM109Q9BVC6 243 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 SIK2Q9H0K1 926 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 EPB41L1Q9H4G0 881 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 SIAEQ9HAT2 523 aa5.66□□□□□ -1.5
CD47-201ENST00000355354 ADAMTS20P59510 1910 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 OR2W5A6NFC9 320 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 TMEM202A6NGA9 273 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 RECKO95980 971 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 VCLP18206 1134 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 STAT5BP51692 787 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 SEMA3BQ13214 749 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 NME3Q13232 169 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 SNCBQ16143 134 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 HIF1AQ16665 826 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 FASTKD1Q53R41 847 aaKnown RBP5.65□□□□□ -1.5
CD47-201ENST00000355354 TMCO4Q5TGY1 634 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 METAP1DQ6UB28 335 aaPredicted RBP5.65□□□□□ -1.5
CD47-201ENST00000355354 LRRC74BQ6ZQY2 392 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 IGSF8Q969P0 613 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 ZNF524Q96C55 264 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 MYRFLQ96LU7 910 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 PPARGC1AQ9UBK2 798 aaKnown RBP5.65□□□□□ -1.5
CD47-201ENST00000355354 ST14Q9Y5Y6 855 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 ANHXE9PGG2 379 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 SCAMP1O15126 338 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 TBC1D4O60343 1298 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 EFCAB14O75071 495 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 MTX2O75431 263 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 DDHD2O94830 711 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 RB1P06400 928 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 HOXB3P14651 431 aaPredicted RBP5.65□□□□□ -1.5
CD47-201ENST00000355354 FERP16591 822 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 TFEBP19484 476 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 CHRNA3P32297 505 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 LINGO4Q6UY18 593 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 HS2ST1Q7LGA3 356 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 PHF13Q86YI8 300 aaPredicted RBP5.65□□□□□ -1.5
CD47-201ENST00000355354 KATNAL2Q8IYT4 538 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 ALDH16A1Q8IZ83 802 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 PYCR2Q96C36 320 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 OTUB1Q96FW1 271 aaPredicted RBP5.65□□□□□ -1.5
CD47-201ENST00000355354 ALS2CR12Q96Q35 445 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 EDEM3Q9BZQ6 932 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 FAM96AQ9H5X1 160 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 WDR35Q9P2L0 1181 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 GPSM3Q9Y4H4 160 aa5.65□□□□□ -1.5
CD47-201ENST00000355354 GRM6O15303 877 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 SNAP29O95721 258 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 BAG2O95816 211 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 DNTTP04053 509 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 ALDH6A1Q02252 535 aaKnown RBP5.65□□□□□ -1.51
CD47-201ENST00000355354 GNA12Q03113 381 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 TAF11Q15544 211 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 PUS10Q3MIT2 529 aaKnown RBP5.65□□□□□ -1.51
CD47-201ENST00000355354 ZIK1Q3SY52 487 aaPredicted RBP5.65□□□□□ -1.51
CD47-201ENST00000355354 TIGD5Q53EQ6 642 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 ARHGEF16Q5VV41 709 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 CAPRIN2Q6IMN6 1127 aaKnown RBP5.65□□□□□ -1.51
CD47-201ENST00000355354 CLEC20AQ6ZU45 233 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 RCOR2Q8IZ40 523 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 FNIP1Q8TF40 1166 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 GPRASP2Q96D09 838 aa5.65□□□□□ -1.51
CD47-201ENST00000355354 ZC3H10Q96K80 434 aaKnown RBP5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms