RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 PIK3R6Q5UE93 754 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 FBXO42Q6P3S6 717 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 CYP20A1Q6UW02 462 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 ZYG11AQ6WRX3 759 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 COMMD2Q86X83 199 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 HSFY1Q96LI6 401 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 TPK1Q9H3S4 243 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 RASSF1Q9NS23 344 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 SERPINB7O75635 380 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 UGT2B4P06133 528 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 POU5F1Q01860 360 aaKnown RBP12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 R3HCC1LQ7Z5L2 792 aaKnown RBP12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 GALNT5Q7Z7M9 940 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 SIPA1Q96FS4 1042 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 PRDM12Q9H4Q4 367 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 ELP3Q9H9T3 547 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 U3KQV3 271 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 OR14I1A6ND48 311 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 TRIM64CA6NLI5 447 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 FAM47E-STBD1D6RA91 191 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 SLC30A4O14863 429 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 CATP04040 527 aaKnown RBP12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 IDH3AP50213 366 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 RPL7AP62424 266 aaKnown RBP12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 LIPEQ05469 1076 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 SMCO1Q147U7 214 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 TRMT11Q7Z4G4 463 aaKnown RBP12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 ALG2Q9H553 416 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 OR12D3Q9UGF7 316 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 IPO13O94829 963 aaKnown RBP12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 ITIH1P19827 911 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 SLC6A2P23975 617 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 RAB2AP61019 212 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 MTAPQ13126 283 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 E2F2Q14209 437 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 RALGPS1Q5JS13 557 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 AHSA2Q719I0 299 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 TMEM110Q86TL2 294 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 PHACTR4Q8IZ21 702 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 OR8H3Q8N146 312 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 PACRGLQ8N7B6 248 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 NXF3Q9H4D5 531 aaKnown RBP12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 ABCB9Q9NP78 766 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 CYP3A7-CYP3A51PA0A087WV96 503 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 SPTLC1O15269 473 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 PAPSS1O43252 624 aaPredicted RBP12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 TSPAN3O60637 253 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 TCEA3O75764 348 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 FGRP09769 529 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 CYP3A7P24462 503 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 PTGIRP43119 386 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 SWI5Q1ZZU3 235 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 BHMTQ93088 406 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 ZNF607Q96SK3 696 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 ZFYVE1Q9HBF4 777 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 FKBP14Q9NWM8 211 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 VWA7Q9Y334 891 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 PCDHB12Q9Y5F1 795 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 STX16-NPEPL1H3BU86 382 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 STX16O14662 325 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 FFAR3O14843 346 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 GPR42O15529 346 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 TBX1O43435 398 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 RBM48Q5RL73 367 aaKnown RBP12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 ADAM32Q8TC27 787 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 ELOVL7A1L3X0 281 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 FECHP22830 423 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 TMEM132BQ14DG7 1078 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 NCCRP1Q6ZVX7 275 aaPredicted RBP12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 DNERQ8NFT8 737 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 DMRTB1Q96MA1 342 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 SNTG2Q9NY99 539 aa12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 POLR3HQ9Y535 204 aaPredicted RBP12.72□□□□□ -0.37
SYNCRIP-201ENST00000355238 SCELO95171 688 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 KLRK1P26718 216 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 HOXD10P28358 340 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 ARMC12Q5T9G4 340 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 SCIMPQ6UWF3 145 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 BANPQ8N9N5 519 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 CPT1BQ92523 772 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 TOP1MTQ969P6 601 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 NKIRAS2Q9NYR9 191 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 CD163L1Q9NR16 1453 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 TISP43B9A030 160 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 RPLP2P05387 115 aaKnown RBP12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 FABP3P05413 133 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 ZNF829Q3KNS6 432 aaPredicted RBP12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 CTXN3Q4LDR2 81 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 RIOX2Q8IUF8 465 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 RBM12BQ8IXT5 1001 aaKnown RBP12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 ZDHHC15Q96MV8 337 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 ELOVL4Q9GZR5 314 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 SLC22A4Q9H015 551 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 CASZ1Q86V15 1759 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 PRAMEF33A0A0G2JMD5 474 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 A0A0G2JPF8 293 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 FAM149AA5PLN7 773 aa12.71□□□□□ -0.37
SYNCRIP-201ENST00000355238 HNRNPCL3B7ZW38 293 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms