RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 CADM2Q8N3J6 435 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 EFHBQ8N7U6 833 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.04□□□□□ -1.6
SKP1-202ENST00000353411 SLC47A1Q96FL8 570 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 GAD1Q99259 594 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 EGFL8Q99944 293 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 ITPAQ9BY32 194 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 RPF2Q9H7B2 306 aaKnown RBP5.04□□□□□ -1.6
SKP1-202ENST00000353411 MAT2BQ9NZL9 334 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 CD274Q9NZQ7 290 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 TMEM216Q9P0N5 145 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 COPZ2Q9P299 210 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 XPR1Q9UBH6 696 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 CYTH4Q9UIA0 394 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 PLEKHA6Q9Y2H5 1048 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 PCDHB12Q9Y5F1 795 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 DENND3A2RUS2 1198 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 RNASEH2AO75792 299 aaKnown RBP5.04□□□□□ -1.6
SKP1-202ENST00000353411 PGK1P00558 417 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 MYF6P23409 242 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 IGFBP5P24593 272 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 DCKP27707 260 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 GSTM2P28161 218 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 MSX2P35548 267 aaPredicted RBP5.04□□□□□ -1.6
SKP1-202ENST00000353411 AP2S1P53680 142 aaPredicted RBP5.04□□□□□ -1.6
SKP1-202ENST00000353411 RAB2AP61019 212 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 RFTN1Q14699 578 aaPredicted RBP5.04□□□□□ -1.6
SKP1-202ENST00000353411 DUOXA2Q1HG44 320 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 HKDC1Q2TB90 917 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 SPDYE2Q495Y8 402 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 STXBP5Q5T5C0 1151 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 PMEPA1Q969W9 287 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 TCEAL4Q96EI5 215 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 CCDC120Q96HB5 630 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 ANKRD60Q9BZ19 345 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 GREM2Q9H772 168 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 RC3H2Q9HBD1 1191 aaKnown RBP5.04□□□□□ -1.6
SKP1-202ENST00000353411 NRBP2Q9NSY0 501 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 TAS2R7Q9NYW3 318 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 SH3BP4Q9P0V3 963 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 ZNF112Q9UJU3 913 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 MST1RQ04912 1400 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 RICTORQ6R327 1708 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 SCAMP3O14828 347 aaKnown RBP5.04□□□□□ -1.6
SKP1-202ENST00000353411 KLRC4O43908 158 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 IL18RAPO95256 599 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 NPPAP01160 153 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 RAB3AP20336 220 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 KCNA5P22460 613 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 GSTM5P46439 218 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 MAPKAPK2P49137 400 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 ATP12AP54707 1039 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 RPL6Q02878 288 aaKnown RBP5.04□□□□□ -1.6
SKP1-202ENST00000353411 CDK10Q15131 360 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 FSCN1Q16658 493 aaKnown RBP5.04□□□□□ -1.6
SKP1-202ENST00000353411 AKIRIN2Q53H80 203 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 SLFN13Q68D06 897 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 ERMP1Q7Z2K6 904 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 EPHX4Q8IUS5 362 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 ABHD11Q8NFV4 315 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 SNIP1Q8TAD8 396 aaKnown RBP5.04□□□□□ -1.6
SKP1-202ENST00000353411 C9orf43Q8TAL5 461 aaPredicted RBP5.04□□□□□ -1.6
SKP1-202ENST00000353411 IFT43Q96FT9 208 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 CRELD1Q96HD1 420 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 SLITRK1Q96PX8 696 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 SEZ6LQ9BYH1 1024 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 UCK2Q9BZX2 261 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 C12orf10Q9HB07 376 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 PNPOQ9NVS9 261 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 RBAKQ9NYW8 714 aaPredicted RBP5.04□□□□□ -1.6
SKP1-202ENST00000353411 CYP3A7-CYP3A51PA0A087WV96 503 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 MUSKO15146 869 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 CABYRO75952 493 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 IL1BP01584 269 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 CYP3A7P24462 503 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 VARSP26640 1264 aaKnown RBP5.04□□□□□ -1.6
SKP1-202ENST00000353411 LCN1P31025 176 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 CTSKP43235 329 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 NR4A2P43354 598 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 ASTE1Q2TB18 679 aaPredicted RBP5.04□□□□□ -1.6
SKP1-202ENST00000353411 MGAT5BQ3V5L5 792 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 SCARA5Q6ZMJ2 495 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 SNX20Q7Z614 316 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 CHERPQ8IWX8 916 aaKnown RBP5.04□□□□□ -1.6
SKP1-202ENST00000353411 NIM1KQ8IY84 436 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 SLC37A3Q8NCC5 494 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 BBS4Q96RK4 519 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 FAM83DQ9H4H8 585 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 HPF1Q9NWY4 346 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 USP18Q9UMW8 372 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 A0A088AWK7 358 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 KRBOX1C9JBD0 128 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 DFFAO00273 331 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 IFRD1O00458 451 aaPredicted RBP5.04□□□□□ -1.6
SKP1-202ENST00000353411 ACOX3O15254 700 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 ACSL4O60488 711 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 ERN1O75460 977 aaKnown RBP5.04□□□□□ -1.6
SKP1-202ENST00000353411 RP2O75695 350 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 CYP3A4P08684 503 aa5.04□□□□□ -1.6
SKP1-202ENST00000353411 CCNYL3P0C7X3 344 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 249 ms