RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 KMT5AQ9NQR1 393 aa13.27□□□□□ -0.28
IFT88-202ENST00000351808 INTS10Q9NVR2 710 aaKnown RBP13.27□□□□□ -0.28
IFT88-202ENST00000351808 GTSE1Q9NYZ3 720 aa13.27□□□□□ -0.28
IFT88-202ENST00000351808 ZMAT5Q9UDW3 170 aaKnown RBP13.27□□□□□ -0.28
IFT88-202ENST00000351808 BCLAF3A2AJT9 711 aaKnown RBP13.27□□□□□ -0.29
IFT88-202ENST00000351808 FAM25AB3EWG3 89 aa13.27□□□□□ -0.29
IFT88-202ENST00000351808 FAM25CB3EWG5 89 aa13.27□□□□□ -0.29
IFT88-202ENST00000351808 FAM25GB3EWG6 89 aa13.27□□□□□ -0.29
IFT88-202ENST00000351808 PHLPP1O60346 1717 aa13.27□□□□□ -0.29
IFT88-202ENST00000351808 DBTP11182 482 aaKnown RBP13.27□□□□□ -0.29
IFT88-202ENST00000351808 NCK1P16333 377 aa13.27□□□□□ -0.29
IFT88-202ENST00000351808 GRIK1P39086 918 aa13.27□□□□□ -0.29
IFT88-202ENST00000351808 DGCR6Q14129 220 aa13.27□□□□□ -0.29
IFT88-202ENST00000351808 CAPRIN1Q14444 709 aaKnown RBP13.27□□□□□ -0.29
IFT88-202ENST00000351808 STK11Q15831 433 aa13.27□□□□□ -0.29
IFT88-202ENST00000351808 DENND1BQ6P3S1 775 aa13.27□□□□□ -0.29
IFT88-202ENST00000351808 AFAP1L2Q8N4X5 818 aa13.27□□□□□ -0.29
IFT88-202ENST00000351808 FBXL6Q8N531 539 aa13.27□□□□□ -0.29
IFT88-202ENST00000351808 BEST2Q8NFU1 509 aa13.27□□□□□ -0.29
IFT88-202ENST00000351808 TTC9Q92623 222 aa13.27□□□□□ -0.29
IFT88-202ENST00000351808 RPL3LQ92901 407 aaKnown RBP13.27□□□□□ -0.29
IFT88-202ENST00000351808 AGAP2Q99490 1192 aa13.27□□□□□ -0.29
IFT88-202ENST00000351808 RBBP8Q99708 897 aa13.27□□□□□ -0.29
IFT88-202ENST00000351808 SMOC2Q9H3U7 446 aa13.27□□□□□ -0.29
IFT88-202ENST00000351808 CYTH4Q9UIA0 394 aa13.27□□□□□ -0.29
IFT88-202ENST00000351808 TTC24A2A3L6 582 aaPredicted RBP13.26□□□□□ -0.29
IFT88-202ENST00000351808 SAGE2PA6NJ88 616 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 PDHXO00330 501 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 ENDOD1O94919 500 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 ARHGEF15O94989 841 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 NDUFB10O96000 172 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 FCGR1AP12314 374 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 IMPDH1P20839 514 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 SPRP35270 261 aaPredicted RBP13.26□□□□□ -0.29
IFT88-202ENST00000351808 ZNF132P52740 706 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 EMX1Q04741 257 aaPredicted RBP13.26□□□□□ -0.29
IFT88-202ENST00000351808 CTU2Q2VPK5 515 aaKnown RBP13.26□□□□□ -0.29
IFT88-202ENST00000351808 DALRD3Q5D0E6 543 aaKnown RBP13.26□□□□□ -0.29
IFT88-202ENST00000351808 LCN8Q6JVE9 175 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 TMEM151AQ8N4L1 468 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 FAR1Q8WVX9 515 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 BSNDQ8WZ55 320 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 CCDC120Q96HB5 630 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 GAD1Q99259 594 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 CPNE1Q99829 537 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 DDX4Q9NQI0 724 aaKnown RBP13.26□□□□□ -0.29
IFT88-202ENST00000351808 PAK1IP1Q9NWT1 392 aaPredicted RBP13.26□□□□□ -0.29
IFT88-202ENST00000351808 DPP3Q9NY33 737 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 ACTR3BQ9P1U1 418 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 FBXO5Q9UKT4 447 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 ZNF541Q9H0D2 1346 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 TRPC5OSA6NMA1 111 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 IFI30P13284 250 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 ATF3P18847 181 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 TBXAS1P24557 533 aaPredicted RBP13.26□□□□□ -0.29
IFT88-202ENST00000351808 YWHABP31946 246 aaKnown RBP13.26□□□□□ -0.29
IFT88-202ENST00000351808 GRK3P35626 688 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 NUDT1P36639 197 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 TAGLNQ01995 201 aaKnown RBP13.26□□□□□ -0.29
IFT88-202ENST00000351808 POU5F1BQ06416 359 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 GALNT7Q86SF2 657 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 P2RY8Q86VZ1 359 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 UBQLNLQ8IYU4 475 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 CLEC4FQ8N1N0 589 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 CCDC185Q8N715 623 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 SNAPC3Q92966 411 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 EXD2Q9NVH0 621 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 SYBUQ9NX95 663 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 FBXL12Q9NXK8 326 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 FADS2P1A8MWK0 482 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 APOL1O14791 398 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 RIMBP2O15034 1052 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 SLC4A1P02730 911 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 HNRNPLP14866 589 aaKnown RBP eCLIP13.26□□□□□ -0.29
IFT88-202ENST00000351808 TCF3P15923 654 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 PGAM1P18669 254 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 CBLP22681 906 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 IL32P24001 234 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 IL4RP24394 825 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 SLC9A3P48764 834 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 ARSFP54793 590 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 ARPP19P56211 112 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 FOXD4Q12950 439 aaPredicted RBP13.26□□□□□ -0.29
IFT88-202ENST00000351808 DMP1Q13316 513 aaPredicted RBP13.26□□□□□ -0.29
IFT88-202ENST00000351808 CDO1Q16878 200 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 PLD3Q8IV08 490 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 CERS2Q96G23 380 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 ZNF300Q96RE9 604 aaPredicted RBP13.26□□□□□ -0.29
IFT88-202ENST00000351808 SLC30A3Q99726 388 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 OMDQ99983 421 aa13.26□□□□□ -0.29
IFT88-202ENST00000351808 C6orf62Q9GZU0 229 aaPredicted RBP13.26□□□□□ -0.29
IFT88-202ENST00000351808 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.26□□□□□ -0.29
IFT88-202ENST00000351808 MTF2Q9Y483 593 aaPredicted RBP13.26□□□□□ -0.29
IFT88-202ENST00000351808 SHANK3Q9BYB0 1731 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 PCP4L1A6NKN8 68 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 TRIM77I1YAP6 450 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 SHOXO15266 292 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 SOAT2O75908 522 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 CABYRO75952 493 aa13.25□□□□□ -0.29
IFT88-202ENST00000351808 MPOP05164 745 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms