RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 GPR62Q9BZJ7 368 aa22.15■■□□□ 1.14
UPF3A-201ENST00000351487 CRISPLD1Q9H336 500 aa22.15■■□□□ 1.14
UPF3A-201ENST00000351487 TBC1D30Q9Y2I9 924 aa22.15■■□□□ 1.14
UPF3A-201ENST00000351487 CCDC162PA2VCL2 907 aa22.15■■□□□ 1.14
UPF3A-201ENST00000351487 FBP2O00757 339 aa22.15■■□□□ 1.14
UPF3A-201ENST00000351487 AHCYL1O43865 530 aa22.15■■□□□ 1.14
UPF3A-201ENST00000351487 SUPT7LO94864 414 aa22.15■■□□□ 1.14
UPF3A-201ENST00000351487 VNN2O95498 520 aa22.15■■□□□ 1.14
UPF3A-201ENST00000351487 ARSAP15289 507 aa22.15■■□□□ 1.14
UPF3A-201ENST00000351487 TYSND1Q2T9J0 566 aa22.15■■□□□ 1.14
UPF3A-201ENST00000351487 REP15Q6BDI9 236 aa22.15■■□□□ 1.14
UPF3A-201ENST00000351487 FBXL19Q6PCT2 694 aa22.15■■□□□ 1.14
UPF3A-201ENST00000351487 ST13P4Q8IZP2 240 aaPredicted RBP22.15■■□□□ 1.14
UPF3A-201ENST00000351487 ADCY4Q8NFM4 1077 aa22.15■■□□□ 1.14
UPF3A-201ENST00000351487 TOP1MTQ969P6 601 aa22.15■■□□□ 1.14
UPF3A-201ENST00000351487 ASB2Q96Q27 587 aa22.15■■□□□ 1.14
UPF3A-201ENST00000351487 SLC24A3Q9HC58 644 aa22.15■■□□□ 1.14
UPF3A-201ENST00000351487 SLC27A5Q9Y2P5 690 aa22.15■■□□□ 1.14
UPF3A-201ENST00000351487 DENRO43583 198 aaKnown RBP22.14■■□□□ 1.14
UPF3A-201ENST00000351487 AP1G1O43747 822 aa22.14■■□□□ 1.14
UPF3A-201ENST00000351487 FOLH1Q04609 750 aa22.14■■□□□ 1.14
UPF3A-201ENST00000351487 SEMA3AQ14563 771 aa22.14■■□□□ 1.14
UPF3A-201ENST00000351487 MGAT5BQ3V5L5 792 aa22.14■■□□□ 1.14
UPF3A-201ENST00000351487 KLHL32Q96NJ5 620 aa22.14■■□□□ 1.14
UPF3A-201ENST00000351487 TRIB3Q96RU7 358 aa22.14■■□□□ 1.14
UPF3A-201ENST00000351487 ZIC5Q96T25 663 aa22.14■■□□□ 1.14
UPF3A-201ENST00000351487 MGME1Q9BQP7 344 aa22.14■■□□□ 1.14
UPF3A-201ENST00000351487 HACD3Q9P035 362 aa22.14■■□□□ 1.14
UPF3A-201ENST00000351487 CCDC189A1A4V9 331 aa22.14■■□□□ 1.13
UPF3A-201ENST00000351487 TLR5O60602 858 aa22.14■■□□□ 1.13
UPF3A-201ENST00000351487 GPC4O75487 556 aa22.14■■□□□ 1.13
UPF3A-201ENST00000351487 SERPINF2P08697 491 aa22.14■■□□□ 1.13
UPF3A-201ENST00000351487 HOXD9P28356 352 aaPredicted RBP22.14■■□□□ 1.13
UPF3A-201ENST00000351487 ACADVLP49748 655 aa22.14■■□□□ 1.13
UPF3A-201ENST00000351487 CAP1Q01518 475 aa22.14■■□□□ 1.13
UPF3A-201ENST00000351487 SMARCB1Q12824 385 aa22.14■■□□□ 1.13
UPF3A-201ENST00000351487 PDAP1Q13442 181 aaKnown RBP22.14■■□□□ 1.13
UPF3A-201ENST00000351487 GALNT3Q14435 633 aa22.14■■□□□ 1.13
UPF3A-201ENST00000351487 PDK3Q15120 406 aa22.14■■□□□ 1.13
UPF3A-201ENST00000351487 UGT3A2Q3SY77 523 aa22.14■■□□□ 1.13
UPF3A-201ENST00000351487 AGKQ53H12 422 aa22.14■■□□□ 1.13
UPF3A-201ENST00000351487 LILRA2Q8N149 483 aa22.14■■□□□ 1.13
UPF3A-201ENST00000351487 MARVELD2Q8N4S9 558 aa22.14■■□□□ 1.13
UPF3A-201ENST00000351487 OR52K2Q8NGK3 314 aa22.14■■□□□ 1.13
UPF3A-201ENST00000351487 RHEBL1Q8TAI7 183 aa22.14■■□□□ 1.13
UPF3A-201ENST00000351487 B3GALT6Q96L58 329 aa22.14■■□□□ 1.13
UPF3A-201ENST00000351487 SEPT5Q99719 369 aaPredicted RBP22.14■■□□□ 1.13
UPF3A-201ENST00000351487 SLC25A23Q9BV35 468 aa22.14■■□□□ 1.13
UPF3A-201ENST00000351487 CCSER2Q9H7U1 834 aa22.14■■□□□ 1.13
UPF3A-201ENST00000351487 CATSPERZQ9NTU4 200 aa22.14■■□□□ 1.13
UPF3A-201ENST00000351487 CEP350Q5VT06 3117 aa22.13■■□□□ 1.13
UPF3A-201ENST00000351487 F5H5T6 163 aa22.13■■□□□ 1.13
UPF3A-201ENST00000351487 TRIM24O15164 1050 aa22.13■■□□□ 1.13
UPF3A-201ENST00000351487 NDST3O95803 873 aa22.13■■□□□ 1.13
UPF3A-201ENST00000351487 SLC4A1P02730 911 aa22.13■■□□□ 1.13
UPF3A-201ENST00000351487 SNRPB2P08579 225 aaKnown RBP22.13■■□□□ 1.13
UPF3A-201ENST00000351487 STC1P52823 247 aa22.13■■□□□ 1.13
UPF3A-201ENST00000351487 ARPP19P56211 112 aa22.13■■□□□ 1.13
UPF3A-201ENST00000351487 TRIM25Q14258 630 aaKnown RBP22.13■■□□□ 1.13
UPF3A-201ENST00000351487 CLEC6AQ6EIG7 209 aa22.13■■□□□ 1.13
UPF3A-201ENST00000351487 UGT2A3Q6UWM9 527 aa22.13■■□□□ 1.13
UPF3A-201ENST00000351487 HACD2Q6Y1H2 254 aa22.13■■□□□ 1.13
UPF3A-201ENST00000351487 OR13C4Q8NGS5 318 aa22.13■■□□□ 1.13
UPF3A-201ENST00000351487 C19orf60Q96EN9 201 aa22.13■■□□□ 1.13
UPF3A-201ENST00000351487 GLT1D1Q96MS3 346 aa22.13■■□□□ 1.13
UPF3A-201ENST00000351487 GCNAQ96QF7 691 aa22.13■■□□□ 1.13
UPF3A-201ENST00000351487 RETREG1Q9H6L5 497 aa22.13■■□□□ 1.13
UPF3A-201ENST00000351487 MARCH5Q9NX47 278 aa22.13■■□□□ 1.13
UPF3A-201ENST00000351487 ADA2Q9NZK5 511 aa22.13■■□□□ 1.13
UPF3A-201ENST00000351487 CCDC167Q9P0B6 97 aa22.13■■□□□ 1.13
UPF3A-201ENST00000351487 EPS15L1Q9UBC2 864 aa22.13■■□□□ 1.13
UPF3A-201ENST00000351487 TBC1D4O60343 1298 aa22.12■■□□□ 1.13
UPF3A-201ENST00000351487 TRPA1O75762 1119 aa22.12■■□□□ 1.13
UPF3A-201ENST00000351487 IRX1P78414 480 aaPredicted RBP22.12■■□□□ 1.13
UPF3A-201ENST00000351487 PTPRCAPQ14761 206 aa22.12■■□□□ 1.13
UPF3A-201ENST00000351487 CLYBLQ8N0X4 340 aa22.12■■□□□ 1.13
UPF3A-201ENST00000351487 OR4L1Q8NH43 312 aa22.12■■□□□ 1.13
UPF3A-201ENST00000351487 AARSD1Q9BTE6 412 aaKnown RBP22.12■■□□□ 1.13
UPF3A-201ENST00000351487 MAGEH1Q9H213 219 aa22.12■■□□□ 1.13
UPF3A-201ENST00000351487 ELAC1Q9H777 363 aaKnown RBP22.12■■□□□ 1.13
UPF3A-201ENST00000351487 COPS7BQ9H9Q2 264 aaPredicted RBP22.12■■□□□ 1.13
UPF3A-201ENST00000351487 RAB26Q9ULW5 256 aa22.12■■□□□ 1.13
UPF3A-201ENST00000351487 E7ENX8 843 aa22.12■■□□□ 1.13
UPF3A-201ENST00000351487 C8BP07358 591 aa22.12■■□□□ 1.13
UPF3A-201ENST00000351487 FGF4P08620 206 aa22.12■■□□□ 1.13
UPF3A-201ENST00000351487 C8orf82Q6P1X6 216 aaPredicted RBP22.12■■□□□ 1.13
UPF3A-201ENST00000351487 RSPO2Q6UXX9 243 aaPredicted RBP22.12■■□□□ 1.13
UPF3A-201ENST00000351487 RNF19BQ6ZMZ0 732 aa22.12■■□□□ 1.13
UPF3A-201ENST00000351487 LGI2Q8N0V4 545 aa22.12■■□□□ 1.13
UPF3A-201ENST00000351487 PCDH20Q8N6Y1 951 aaKnown RBP22.12■■□□□ 1.13
UPF3A-201ENST00000351487 TFB2MQ9H5Q4 396 aaKnown RBP22.12■■□□□ 1.13
UPF3A-201ENST00000351487 INTS10Q9NVR2 710 aaKnown RBP22.12■■□□□ 1.13
UPF3A-201ENST00000351487 MTHFD2P13995 350 aa22.11■■□□□ 1.13
UPF3A-201ENST00000351487 CHN2P52757 468 aa22.11■■□□□ 1.13
UPF3A-201ENST00000351487 BBS5Q8N3I7 341 aa22.11■■□□□ 1.13
UPF3A-201ENST00000351487 PTGR2Q8N8N7 351 aaPredicted RBP22.11■■□□□ 1.13
UPF3A-201ENST00000351487 ATOH8Q96SQ7 321 aa22.11■■□□□ 1.13
UPF3A-201ENST00000351487 Q9H521 79 aa22.11■■□□□ 1.13
UPF3A-201ENST00000351487 PIDD1Q9HB75 910 aa22.11■■□□□ 1.13
UPF3A-201ENST00000351487 SPAG4Q9NPE6 437 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms