RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 BNIP3LO60238 219 aa13.46□□□□□ -0.26
UBA3-201ENST00000349511 SERPINF2P08697 491 aa13.46□□□□□ -0.26
UBA3-201ENST00000349511 FGF3P11487 239 aaPredicted RBP13.46□□□□□ -0.26
UBA3-201ENST00000349511 ANPEPP15144 967 aa13.46□□□□□ -0.26
UBA3-201ENST00000349511 GKP32189 559 aa13.46□□□□□ -0.26
UBA3-201ENST00000349511 ABCG1P45844 678 aa13.46□□□□□ -0.26
UBA3-201ENST00000349511 TUBB3Q13509 450 aa13.46□□□□□ -0.26
UBA3-201ENST00000349511 PTPRRQ15256 657 aa13.46□□□□□ -0.26
UBA3-201ENST00000349511 DBN1Q16643 649 aa13.46□□□□□ -0.26
UBA3-201ENST00000349511 TRMT5Q32P41 509 aaKnown RBP13.46□□□□□ -0.26
UBA3-201ENST00000349511 FAM78AQ5JUQ0 283 aa13.46□□□□□ -0.26
UBA3-201ENST00000349511 N4BP2L1Q5TBK1 243 aaPredicted RBP13.46□□□□□ -0.26
UBA3-201ENST00000349511 C6orf163Q5TEZ5 329 aa13.46□□□□□ -0.26
UBA3-201ENST00000349511 NAIF1Q69YI7 327 aaPredicted RBP13.46□□□□□ -0.26
UBA3-201ENST00000349511 ESRP1Q6NXG1 681 aaKnown RBP13.46□□□□□ -0.26
UBA3-201ENST00000349511 MYLK4Q86YV6 388 aaPredicted RBP13.46□□□□□ -0.26
UBA3-201ENST00000349511 NPAS3Q8IXF0 933 aa13.46□□□□□ -0.26
UBA3-201ENST00000349511 PNPLA1Q8N8W4 532 aa13.46□□□□□ -0.26
UBA3-201ENST00000349511 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.46□□□□□ -0.26
UBA3-201ENST00000349511 FIBINQ8TAL6 211 aa13.46□□□□□ -0.26
UBA3-201ENST00000349511 CERS2Q96G23 380 aa13.46□□□□□ -0.26
UBA3-201ENST00000349511 VPS45Q9NRW7 570 aa13.46□□□□□ -0.26
UBA3-201ENST00000349511 KIAA1522Q9P206 1035 aaPredicted RBP13.46□□□□□ -0.26
UBA3-201ENST00000349511 SLC7A8Q9UHI5 535 aa13.46□□□□□ -0.26
UBA3-201ENST00000349511 SOX13Q9UN79 622 aa13.46□□□□□ -0.26
UBA3-201ENST00000349511 DNAJC16Q9Y2G8 782 aa13.46□□□□□ -0.26
UBA3-201ENST00000349511 A0A0U1RQS6 177 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 MEI4A8MW99 385 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 CCL22O00626 93 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 INSIG1O15503 277 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 GLRA3O75311 464 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 USP1O94782 785 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 ALDOAP04075 364 aaKnown RBP13.45□□□□□ -0.26
UBA3-201ENST00000349511 FSHRP23945 695 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 SLC1A6P48664 564 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 ERFP50548 548 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 ACTR3P61158 418 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 RHOAP61586 193 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 TNK2Q07912 1038 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 PDE1CQ14123 709 aaPredicted RBP13.45□□□□□ -0.26
UBA3-201ENST00000349511 PLEKHG6Q3KR16 790 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 PCID2Q5JVF3 399 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 MPP7Q5T2T1 576 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 TEDDM1Q5T9Z0 273 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 PACS1Q6VY07 963 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 CHRDL2Q6WN34 429 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 RASSF3Q86WH2 238 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 CCNJLQ8IV13 435 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 WDR75Q8IWA0 830 aaKnown RBP13.45□□□□□ -0.26
UBA3-201ENST00000349511 PIWIL2Q8TC59 973 aaKnown RBP13.45□□□□□ -0.26
UBA3-201ENST00000349511 BLOC1S5Q8TDH9 187 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 ACMSDQ8TDX5 336 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 ASIC4Q96FT7 647 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 NAT9Q9BTE0 207 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 C1orf21Q9H246 121 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 TNKS2Q9H2K2 1166 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 C20orf96Q9NUD7 363 aaPredicted RBP13.45□□□□□ -0.26
UBA3-201ENST00000349511 BRWD1Q9NSI6 2320 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 MAP3K13O43283 966 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 ATXN1LP0C7T5 689 aaKnown RBP13.45□□□□□ -0.26
UBA3-201ENST00000349511 AOC1P19801 751 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 KCNA4P22459 653 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 SERPINH1P50454 418 aaKnown RBP13.45□□□□□ -0.26
UBA3-201ENST00000349511 IRX1P78414 480 aaPredicted RBP13.45□□□□□ -0.26
UBA3-201ENST00000349511 DLX2Q07687 328 aaPredicted RBP13.45□□□□□ -0.26
UBA3-201ENST00000349511 USP4Q13107 963 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 PTPRCAPQ14761 206 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 CNGA3Q16281 694 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 SPANXN3Q5MJ09 141 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 PKN3Q6P5Z2 889 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 ZNF783Q6ZMS7 281 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 APLFQ8IW19 511 aaPredicted RBP13.45□□□□□ -0.26
UBA3-201ENST00000349511 DCAF4L2Q8NA75 395 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 TADA1Q96BN2 335 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 PPP1R2P1Q96PQ5 205 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 ZNF184Q99676 751 aaPredicted RBP13.45□□□□□ -0.26
UBA3-201ENST00000349511 SIKE1Q9BRV8 207 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 C2orf49Q9BVC5 232 aaPredicted RBP13.45□□□□□ -0.26
UBA3-201ENST00000349511 VCXQ9H320 206 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 KCTD3Q9Y597 815 aa13.45□□□□□ -0.26
UBA3-201ENST00000349511 TRIOBPQ9H2D6 2365 aa13.44□□□□□ -0.26
UBA3-201ENST00000349511 LOC285095A0A1B0GVY8 99 aa13.44□□□□□ -0.26
UBA3-201ENST00000349511 ENO4A6NNW6 628 aa13.44□□□□□ -0.26
UBA3-201ENST00000349511 PLIN3O60664 434 aa13.44□□□□□ -0.26
UBA3-201ENST00000349511 VAPBO95292 243 aa13.44□□□□□ -0.26
UBA3-201ENST00000349511 SLC4A1P02730 911 aa13.44□□□□□ -0.26
UBA3-201ENST00000349511 CR2P20023 1033 aa13.44□□□□□ -0.26
UBA3-201ENST00000349511 CPOXP36551 454 aa13.44□□□□□ -0.26
UBA3-201ENST00000349511 RFTN1Q14699 578 aaPredicted RBP13.44□□□□□ -0.26
UBA3-201ENST00000349511 PCLAFQ15004 111 aa13.44□□□□□ -0.26
UBA3-201ENST00000349511 FUT11Q495W5 492 aa13.44□□□□□ -0.26
UBA3-201ENST00000349511 PITRM1Q5JRX3 1037 aa13.44□□□□□ -0.26
UBA3-201ENST00000349511 C1orf146Q5VVC0 180 aa13.44□□□□□ -0.26
UBA3-201ENST00000349511 OR52E8Q6IFG1 317 aa13.44□□□□□ -0.26
UBA3-201ENST00000349511 SYCE2Q6PIF2 218 aa13.44□□□□□ -0.26
UBA3-201ENST00000349511 KCNMB4Q86W47 210 aa13.44□□□□□ -0.26
UBA3-201ENST00000349511 CELF5Q8N6W0 485 aaKnown RBP13.44□□□□□ -0.26
UBA3-201ENST00000349511 PPHLN1Q8NEY8 458 aaKnown RBP13.44□□□□□ -0.26
UBA3-201ENST00000349511 CDKL2Q92772 493 aa13.44□□□□□ -0.26
UBA3-201ENST00000349511 RMDN1Q96DB5 314 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms