RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 OLFML1Q6UWY5 402 aa14.77□□□□□ -0.05
NUP50-201ENST00000347635 TMEM110Q86TL2 294 aa14.77□□□□□ -0.05
NUP50-201ENST00000347635 ADHFE1Q8IWW8 467 aa14.77□□□□□ -0.05
NUP50-201ENST00000347635 PGBD3Q8N328 593 aa14.77□□□□□ -0.05
NUP50-201ENST00000347635 LPPQ93052 612 aa14.77□□□□□ -0.05
NUP50-201ENST00000347635 SH3KBP1Q96B97 665 aa14.77□□□□□ -0.05
NUP50-201ENST00000347635 RAD21L1Q9H4I0 556 aa14.77□□□□□ -0.05
NUP50-201ENST00000347635 RIBC2Q9H4K1 309 aa14.77□□□□□ -0.05
NUP50-201ENST00000347635 INVSQ9Y283 1065 aa14.77□□□□□ -0.05
NUP50-201ENST00000347635 RGS14O43566 566 aa14.77□□□□□ -0.05
NUP50-201ENST00000347635 SEC22BO75396 215 aa14.77□□□□□ -0.05
NUP50-201ENST00000347635 SLC10A3P09131 477 aa14.77□□□□□ -0.05
NUP50-201ENST00000347635 ZNF460Q14592 562 aa14.77□□□□□ -0.05
NUP50-201ENST00000347635 NADK2Q4G0N4 442 aa14.77□□□□□ -0.05
NUP50-201ENST00000347635 HDAC10Q969S8 669 aa14.77□□□□□ -0.05
NUP50-201ENST00000347635 DNMT3LQ9UJW3 386 aa14.77□□□□□ -0.05
NUP50-201ENST00000347635 CNTN6Q9UQ52 1028 aa14.77□□□□□ -0.05
NUP50-201ENST00000347635 TCAF1Q9Y4C2 921 aa14.77□□□□□ -0.05
NUP50-201ENST00000347635 FADS3Q9Y5Q0 445 aa14.77□□□□□ -0.05
NUP50-201ENST00000347635 BCORQ6W2J9 1755 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 FGF3P11487 239 aaPredicted RBP14.76□□□□□ -0.05
NUP50-201ENST00000347635 XRCC1P18887 633 aaPredicted RBP14.76□□□□□ -0.05
NUP50-201ENST00000347635 PPP3CCP48454 512 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 ACLYP53396 1101 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 SOWAHAQ2M3V2 549 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 B3GNT9Q6UX72 402 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 TBC1D21Q8IYX1 336 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 PPP1R13LQ8WUF5 828 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 UTP4Q969X6 686 aaKnown RBP14.76□□□□□ -0.05
NUP50-201ENST00000347635 TTPALQ9BTX7 342 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 A6NHS1 94 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 IL1BP01584 269 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 CTNNB1P35222 781 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 MAXP61244 160 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 CLDN10P78369 228 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 NFKBIZQ9BYH8 718 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 OSBPL6Q9BZF3 934 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 ELOVL6Q9H5J4 265 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 TXNRD2Q9NNW7 524 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 KRT6AP02538 564 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 KRT6BP04259 564 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 KRT6CP48668 564 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 ROPN1LQ96C74 230 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 DNAJC1Q96KC8 554 aaKnown RBP14.76□□□□□ -0.05
NUP50-201ENST00000347635 HNRNPABQ99729 332 aaKnown RBP14.76□□□□□ -0.05
NUP50-201ENST00000347635 LPIN3Q9BQK8 851 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 TBCDQ9BTW9 1192 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 ACTR8Q9H981 624 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 ZSCAN9O15535 394 aaPredicted RBP14.76□□□□□ -0.05
NUP50-201ENST00000347635 CCNCP24863 283 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 BRMS1LQ5PSV4 323 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 CLEC6AQ6EIG7 209 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 CBR4Q8N4T8 237 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.76□□□□□ -0.05
NUP50-201ENST00000347635 HEXDCQ8WVB3 486 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 ZYG11BQ9C0D3 744 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 TLE6Q9H808 572 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 AP3M1Q9Y2T2 418 aa14.76□□□□□ -0.05
NUP50-201ENST00000347635 SYN3O14994 580 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 FAM187BQ17R55 369 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 TRIM69Q86WT6 500 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 SPATA22Q8NHS9 363 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 USP29Q9HBJ7 922 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 HPS4Q9NQG7 708 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 CIDEBQ9UHD4 219 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 TNPO3Q9Y5L0 923 aaKnown RBP14.75□□□□□ -0.05
NUP50-201ENST00000347635 DOCK2Q92608 1830 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 A0A088AWK7 358 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 TRAV19A0A0A6YYK7 116 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 H6PDO95479 791 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 ABL2P42684 1182 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 ACAP2Q15057 778 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 TMEM198Q66K66 360 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 TMEM132CQ8N3T6 1108 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 ASB9Q96DX5 294 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 TMEM161AQ9NX61 479 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 CD3EAPO15446 510 aaKnown RBP14.75□□□□□ -0.05
NUP50-201ENST00000347635 CAPN15O75808 1086 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 CPSF4O95639 269 aaKnown RBP14.75□□□□□ -0.05
NUP50-201ENST00000347635 FAM163BP0C2L3 166 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 LMO2P25791 158 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 TXNDC11Q6PKC3 985 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 METTL3Q86U44 580 aaKnown RBP14.75□□□□□ -0.05
NUP50-201ENST00000347635 GTF2IRD1Q9UHL9 959 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 FAM189A1O60320 539 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 PAGE1O75459 146 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 SLC22A3O75751 556 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 DDR2Q16832 855 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 VPS26BQ4G0F5 336 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 AFTPHQ6ULP2 937 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 FCRL2Q96LA5 508 aaPredicted RBP14.75□□□□□ -0.05
NUP50-201ENST00000347635 MUC13Q9H3R2 512 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 ASAH2Q9NR71 780 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 VPS45Q9NRW7 570 aa14.75□□□□□ -0.05
NUP50-201ENST00000347635 FGBP02675 491 aa14.74□□□□□ -0.05
NUP50-201ENST00000347635 GSNP06396 782 aa14.74□□□□□ -0.05
NUP50-201ENST00000347635 FGFR1P11362 822 aa14.74□□□□□ -0.05
NUP50-201ENST00000347635 ITGB6P18564 788 aa14.74□□□□□ -0.05
NUP50-201ENST00000347635 GCAP28676 217 aa14.74□□□□□ -0.05
NUP50-201ENST00000347635 SCNN1AP37088 669 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms