RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 STARD13Q9Y3M8 1113 aa11□□□□□ -0.65
ECM1-201ENST00000346569 NUMBLQ9Y6R0 609 aa11□□□□□ -0.65
ECM1-201ENST00000346569 DENND4AQ7Z401 1863 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 TSPAN11A1L157 253 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 TBC1D3BA6NDS4 549 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.99□□□□□ -0.65
ECM1-201ENST00000346569 H3BQ06 376 aaPredicted RBP10.99□□□□□ -0.65
ECM1-201ENST00000346569 TM9SF1O15321 606 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 STX7O15400 261 aaKnown RBP10.99□□□□□ -0.65
ECM1-201ENST00000346569 CD3EAPO15446 510 aaKnown RBP10.99□□□□□ -0.65
ECM1-201ENST00000346569 BNIP3LO60238 219 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 LEFTY1O75610 366 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 CTSLP07711 333 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 LSP1P33241 339 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 CRHR1P34998 444 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 GRIA2P42262 883 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 ETV4P43268 484 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 RECQLP46063 649 aaPredicted RBP10.99□□□□□ -0.65
ECM1-201ENST00000346569 ST8SIA6P61647 398 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 POLR2LP62875 67 aaKnown RBP10.99□□□□□ -0.65
ECM1-201ENST00000346569 GNGT1P63211 74 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 TMPRSS15P98073 1019 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 MPP1Q00013 466 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 PEX6Q13608 980 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 HNRNPA1L2Q32P51 320 aaKnown RBP10.99□□□□□ -0.65
ECM1-201ENST00000346569 PREPLQ4J6C6 727 aaPredicted RBP10.99□□□□□ -0.65
ECM1-201ENST00000346569 ARSIQ5FYB1 569 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 C9orf64Q5T6V5 341 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 ZNF470Q6ECI4 717 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 CNSTQ6PJW8 725 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 CRTC1Q6UUV9 634 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 TPRG1Q6ZUI0 275 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.99□□□□□ -0.65
ECM1-201ENST00000346569 NDUFAF2Q8N183 169 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 CBARPQ8N350 705 aaPredicted RBP10.99□□□□□ -0.65
ECM1-201ENST00000346569 PNPLA1Q8N8W4 532 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 ANKRD42Q8N9B4 389 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 GABPB2Q8TAK5 448 aaPredicted RBP10.99□□□□□ -0.65
ECM1-201ENST00000346569 TCP10LQ8TDR4 215 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 CKAP2Q8WWK9 683 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 SCG3Q8WXD2 468 aaKnown RBP10.99□□□□□ -0.65
ECM1-201ENST00000346569 KLHL32Q96NJ5 620 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 FAM129BQ96TA1 746 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 ZDHHC6Q9H6R6 413 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 BRD9Q9H8M2 597 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 ZFYVE1Q9HBF4 777 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 TRPV5Q9NQA5 729 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 NKIRAS1Q9NYS0 192 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.99□□□□□ -0.65
ECM1-201ENST00000346569 THAP10Q9P2Z0 257 aaPredicted RBP10.99□□□□□ -0.65
ECM1-201ENST00000346569 DKK3Q9UBP4 350 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 PLLPQ9Y342 182 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 ZNF711Q9Y462 761 aa10.99□□□□□ -0.65
ECM1-201ENST00000346569 BRWD1Q9NSI6 2320 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 ANTXRLA6NF34 631 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 CAPN8A6NHC0 703 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 MBTPS2O43462 519 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 ZWINTO95229 277 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 KAT7O95251 611 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 CLDN7O95471 211 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 UGT2B4P06133 528 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 DHRS4L1P0CG22 281 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 HNRNPLP14866 589 aaKnown RBP eCLIP10.98□□□□□ -0.65
ECM1-201ENST00000346569 TIMP2P16035 220 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 OGNP20774 298 aaKnown RBP10.98□□□□□ -0.65
ECM1-201ENST00000346569 TYK2P29597 1187 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 FOXN2P32314 431 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 ABCG1P45844 678 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 CD151P48509 253 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 CCT5P48643 541 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 GALK1P51570 392 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 KDSRQ06136 332 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 ILF2Q12905 390 aaKnown RBP10.98□□□□□ -0.65
ECM1-201ENST00000346569 ENPP2Q13822 863 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 PDE1CQ14123 709 aaPredicted RBP10.98□□□□□ -0.65
ECM1-201ENST00000346569 SEMA3AQ14563 771 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 ZNF234Q14588 700 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 INSCQ1MX18 579 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 BRAT1Q6PJG6 821 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 LYSMD3Q7Z3D4 306 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 TMIEQ8NEW7 156 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 APOPT1Q96IL0 206 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 GPR63Q9BZJ6 419 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 C12orf65Q9H3J6 166 aaKnown RBP10.98□□□□□ -0.65
ECM1-201ENST00000346569 FBXO6Q9NRD1 293 aaPredicted RBP10.98□□□□□ -0.65
ECM1-201ENST00000346569 SNX15Q9NRS6 342 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 SLC17A7Q9P2U7 560 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 IL36AQ9UHA7 158 aa10.98□□□□□ -0.65
ECM1-201ENST00000346569 EDDM13A0A1B0GTR0 161 aa10.97□□□□□ -0.65
ECM1-201ENST00000346569 C2CD4DB7Z1M9 353 aa10.97□□□□□ -0.65
ECM1-201ENST00000346569 GAPDHSO14556 408 aaPredicted RBP10.97□□□□□ -0.65
ECM1-201ENST00000346569 COPEO14579 308 aa10.97□□□□□ -0.65
ECM1-201ENST00000346569 TPP1O14773 563 aa10.97□□□□□ -0.65
ECM1-201ENST00000346569 MPOP05164 745 aa10.97□□□□□ -0.65
ECM1-201ENST00000346569 C2P06681 752 aa10.97□□□□□ -0.65
ECM1-201ENST00000346569 PRSS56P0CW18 603 aa10.97□□□□□ -0.65
ECM1-201ENST00000346569 SP100P23497 879 aaPredicted RBP10.97□□□□□ -0.65
ECM1-201ENST00000346569 TNFRSF4P43489 277 aa10.97□□□□□ -0.65
ECM1-201ENST00000346569 PTPN5P54829 565 aa10.97□□□□□ -0.65
ECM1-201ENST00000346569 PTSQ03393 145 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms