RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 MRPL17Q9NRX2 175 aaKnown RBP13.33□□□□□ -0.28
CASC4-202ENST00000345795 TAS2R13Q9NYV9 303 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 RCOR3Q9P2K3 495 aaPredicted RBP13.33□□□□□ -0.28
CASC4-202ENST00000345795 PRKAG3Q9UGI9 489 aa13.33□□□□□ -0.28
CASC4-202ENST00000345795 MUSKO15146 869 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 VPS26AO75436 327 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 CRTAMO95727 393 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 CYBBP04839 570 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 GABRB3P28472 473 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 PLOD1Q02809 727 aaPredicted RBP13.32□□□□□ -0.28
CASC4-202ENST00000345795 RAD51Q06609 339 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 C18orf21Q32NC0 220 aaPredicted RBP13.32□□□□□ -0.28
CASC4-202ENST00000345795 TIGD2Q4W5G0 525 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 TSTD2Q5T7W7 516 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 GDPD5Q8WTR4 605 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 MED8Q96G25 268 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 ZNF333Q96JL9 665 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 TMEM106CQ9BVX2 250 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 MLNP12872 115 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 RHOQP17081 205 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 IL27RAQ6UWB1 636 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 ARHGAP12Q8IWW6 846 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 CYB5D2Q8WUJ1 264 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 SLC9A7Q96T83 725 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 THUMPD3Q9BV44 507 aaKnown RBP13.32□□□□□ -0.28
CASC4-202ENST00000345795 RNF38Q9H0F5 515 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 SLC25A51Q9H1U9 297 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 SMOC2Q9H3U7 446 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 KCNK13Q9HB14 408 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 PLAC1Q9HBJ0 212 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 EML4Q9HC35 981 aaKnown RBP13.32□□□□□ -0.28
CASC4-202ENST00000345795 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.32□□□□□ -0.28
CASC4-202ENST00000345795 TET1Q8NFU7 2136 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.32□□□□□ -0.28
CASC4-202ENST00000345795 GSTA4O15217 222 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 SLC35E2BP0CK96 405 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 PEX2P28328 305 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 CSKP41240 450 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 SLC34A1Q06495 639 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 PIWIL4Q7Z3Z4 852 aaKnown RBP13.32□□□□□ -0.28
CASC4-202ENST00000345795 COLGALT2Q8IYK4 626 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 LMNTD1Q8N9Z9 388 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 SPPL2BQ8TCT7 592 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 NUDT8Q8WV74 236 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 ZNF419Q96HQ0 510 aaPredicted RBP13.32□□□□□ -0.28
CASC4-202ENST00000345795 EBF2Q9HAK2 575 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.32□□□□□ -0.28
CASC4-202ENST00000345795 EIF2B4Q9UI10 523 aaKnown RBP13.32□□□□□ -0.28
CASC4-202ENST00000345795 ZNF180Q9UJW8 692 aa13.32□□□□□ -0.28
CASC4-202ENST00000345795 MRASO14807 208 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 PSMD3O43242 534 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 SERPINA6P08185 405 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 TPBGLP0DKB5 382 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 NTHL1P78549 312 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 BCL2L1Q07817 233 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 SLC44A4Q53GD3 710 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 SLC44A2Q8IWA5 706 aaPredicted RBP13.31□□□□□ -0.28
CASC4-202ENST00000345795 SH3RF2Q8TEC5 729 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 WBP2Q969T9 261 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 BBS2Q9BXC9 721 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 ATG10Q9H0Y0 220 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 EFCAB1Q9HAE3 211 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 POLR3BQ9NW08 1133 aaPredicted RBP13.31□□□□□ -0.28
CASC4-202ENST00000345795 GMPR2Q9P2T1 348 aaKnown RBP13.31□□□□□ -0.28
CASC4-202ENST00000345795 KLQ9UEF7 1012 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 TLR6Q9Y2C9 796 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 PSMD12O00232 456 aaPredicted RBP13.31□□□□□ -0.28
CASC4-202ENST00000345795 GRIA3P42263 894 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 CDKN2DP55273 166 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 HNRNPDQ14103 355 aaKnown RBP13.31□□□□□ -0.28
CASC4-202ENST00000345795 POTEHQ6S545 545 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 TMC5Q6UXY8 1006 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 LYSMD3Q7Z3D4 306 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 RALGPS2Q86X27 583 aaPredicted RBP13.31□□□□□ -0.28
CASC4-202ENST00000345795 RELL1Q8IUW5 271 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 CYGBQ8WWM9 190 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 ZFYVE19Q96K21 471 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 CAAP1Q9H8G2 361 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 ABCB8Q9NUT2 735 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 HCFC1R1Q9NWW0 138 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 BHMG1C9JSJ3 638 aaPredicted RBP13.31□□□□□ -0.28
CASC4-202ENST00000345795 TMCC1O94876 653 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 GSNP06396 782 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 THRAP10827 490 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 SLC2A4P14672 509 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 NCK1P16333 377 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 SLC6A4P31645 630 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 PPP3CCP48454 512 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 ZNF648Q5T619 568 aaPredicted RBP13.31□□□□□ -0.28
CASC4-202ENST00000345795 EMC10Q5UCC4 262 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 C11orf74Q86VG3 221 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 C12orf76Q8N812 135 aaPredicted RBP13.31□□□□□ -0.28
CASC4-202ENST00000345795 CEP70Q8NHQ1 597 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 LINC01599Q8WXQ3 324 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 GALPQ9UBC7 116 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 GGA2Q9UJY4 613 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 TRAF6Q9Y4K3 522 aa13.31□□□□□ -0.28
CASC4-202ENST00000345795 HHLA1C9JL84 531 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 INSIG1O15503 277 aa13.3□□□□□ -0.28
CASC4-202ENST00000345795 SYNCRIPO60506 623 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms