RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 SIN3BO75182 1162 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 MOSPD3O75425 235 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 BPGMP07738 259 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 POU2F2P09086 479 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 CSKP41240 450 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 ARCN1P48444 511 aaKnown RBP12.86□□□□□ -0.35
CLK3-201ENST00000345005 BST1Q10588 318 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 TEAD2Q15562 447 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 CNGA3Q16281 694 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 C9orf50Q5SZB4 431 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 DCAF4L2Q8NA75 395 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 FIBINQ8TAL6 211 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 CALML6Q8TD86 181 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 SH3RF2Q8TEC5 729 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 TCEAL4Q96EI5 215 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 ALG14Q96F25 216 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 RILPQ96NA2 401 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 THTPAQ9BU02 230 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 C2orf49Q9BVC5 232 aaPredicted RBP12.86□□□□□ -0.35
CLK3-201ENST00000345005 SLC13A1Q9BZW2 595 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 PCMTD2Q9NV79 361 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 KIAA1522Q9P206 1035 aaPredicted RBP12.86□□□□□ -0.35
CLK3-201ENST00000345005 DCDC2Q9UHG0 476 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 BCAP29Q9UHQ4 241 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 ACTL7AQ9Y615 435 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 NUMBLQ9Y6R0 609 aa12.86□□□□□ -0.35
CLK3-201ENST00000345005 NUP210Q8TEM1 1887 aaPredicted RBP12.86□□□□□ -0.35
CLK3-201ENST00000345005 MROH6A6NGR9 719 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 ZNF197O14709 1029 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 TPP1O14773 563 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 PEX1O43933 1283 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 CCNT2O60583 730 aaKnown RBP12.85□□□□□ -0.35
CLK3-201ENST00000345005 SNAP91O60641 907 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 TMCC1O94876 653 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 ALDOAP04075 364 aaKnown RBP12.85□□□□□ -0.35
CLK3-201ENST00000345005 GRK2P25098 689 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 TYK2P29597 1187 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 PRDX6P30041 224 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 POLD2P49005 469 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 SERPINB8P50452 374 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 MED21Q13503 144 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 ITGA9Q13797 1035 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 MAP7Q14244 749 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 CHI3L2Q15782 390 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 SMAD1Q15797 465 aaKnown RBP12.85□□□□□ -0.35
CLK3-201ENST00000345005 RALGPS1Q5JS13 557 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 FSTL4Q6MZW2 842 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 RETSATQ6NUM9 610 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 IZUMO2Q6UXV1 221 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 ARID3BQ8IVW6 561 aaPredicted RBP12.85□□□□□ -0.35
CLK3-201ENST00000345005 PEX13Q92968 403 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 ISL2Q96A47 359 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 ACDQ96AP0 544 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 CMTM5Q96DZ9 223 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 BTBD9Q96Q07 612 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 MCMBPQ9BTE3 642 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 EPB41L1Q9H4G0 881 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 S100A14Q9HCY8 104 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 TDP1Q9NUW8 608 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 SLC2A6Q9UGQ3 507 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 VPS51Q9UID3 782 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 APOBEC2Q9Y235 224 aaKnown RBP12.85□□□□□ -0.35
CLK3-201ENST00000345005 GOLGA8TH3BQL2 631 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 GLRA3O75311 464 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 GJB3O75712 270 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 CD160O95971 181 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 MPOP05164 745 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 GSTT1P30711 240 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 RGRP47804 291 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 PLK1P53350 603 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 AQP5P55064 265 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 SLC12A1Q13621 1099 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 SHHQ15465 462 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 INSCQ1MX18 579 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 LIN52Q52LA3 116 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 SH2D4BQ5SQS7 431 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 LINGO4Q6UY18 593 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 TPGS1Q6ZTW0 290 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 DCLK2Q8N568 766 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 B4GALNT2Q8NHY0 566 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 PPP1R14CQ8TAE6 165 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 WFDC5Q8TCV5 224 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 BRSK1Q8TDC3 778 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 PPP4R1Q8TF05 950 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 BHMTQ93088 406 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 PPP1R14BQ96C90 147 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 TRIB3Q96RU7 358 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 SPATA16Q9BXB7 569 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 KLHL4Q9C0H6 718 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 SMG9Q9H0W8 520 aaKnown RBP12.85□□□□□ -0.35
CLK3-201ENST00000345005 C12orf65Q9H3J6 166 aaKnown RBP12.85□□□□□ -0.35
CLK3-201ENST00000345005 RHOJQ9H4E5 214 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 Q9H521 79 aa12.85□□□□□ -0.35
CLK3-201ENST00000345005 SUDS3Q9H7L9 328 aaPredicted RBP12.85□□□□□ -0.35
CLK3-201ENST00000345005 LAMA2P24043 3122 aaKnown RBP12.84□□□□□ -0.35
CLK3-201ENST00000345005 CXorf51AA0A1B0GTR3 108 aa12.84□□□□□ -0.35
CLK3-201ENST00000345005 CCDC195A0A1B0GUA6 201 aa12.84□□□□□ -0.35
CLK3-201ENST00000345005 PER2O15055 1255 aa12.84□□□□□ -0.35
CLK3-201ENST00000345005 SLC7A4O43246 635 aa12.84□□□□□ -0.35
CLK3-201ENST00000345005 ARNTP27540 789 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms