RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 TARM1B6A8C7 271 aa13.58□□□□□ -0.24
CDC42-202ENST00000344548 BIRC5O15392 142 aa13.58□□□□□ -0.24
CDC42-202ENST00000344548 SNNO75324 88 aaPredicted RBP13.58□□□□□ -0.24
CDC42-202ENST00000344548 CPA3P15088 417 aa13.58□□□□□ -0.24
CDC42-202ENST00000344548 LPOP22079 712 aaPredicted RBP13.58□□□□□ -0.24
CDC42-202ENST00000344548 PSMA3P25788 255 aa13.58□□□□□ -0.24
CDC42-202ENST00000344548 EPHB1P54762 984 aa13.58□□□□□ -0.24
CDC42-202ENST00000344548 BCL2L1Q07817 233 aa13.58□□□□□ -0.24
CDC42-202ENST00000344548 ITGA9Q13797 1035 aa13.58□□□□□ -0.24
CDC42-202ENST00000344548 CDKN3Q16667 212 aa13.58□□□□□ -0.24
CDC42-202ENST00000344548 EML3Q32P44 896 aa13.58□□□□□ -0.24
CDC42-202ENST00000344548 COL13A1Q5TAT6 717 aaPredicted RBP13.58□□□□□ -0.24
CDC42-202ENST00000344548 ARMC3Q5W041 872 aa13.58□□□□□ -0.24
CDC42-202ENST00000344548 TSPAN33Q86UF1 283 aa13.58□□□□□ -0.24
CDC42-202ENST00000344548 ZNF366Q8N895 744 aa13.58□□□□□ -0.24
CDC42-202ENST00000344548 GPR150Q8NGU9 434 aa13.58□□□□□ -0.24
CDC42-202ENST00000344548 ASB16Q96NS5 453 aa13.58□□□□□ -0.24
CDC42-202ENST00000344548 EBF3Q9H4W6 596 aa13.58□□□□□ -0.24
CDC42-202ENST00000344548 CATSPERZQ9NTU4 200 aa13.58□□□□□ -0.24
CDC42-202ENST00000344548 DUS2Q9NX74 493 aaKnown RBP13.58□□□□□ -0.24
CDC42-202ENST00000344548 IL17CQ9P0M4 197 aa13.58□□□□□ -0.24
CDC42-202ENST00000344548 TLK1Q9UKI8 766 aa13.58□□□□□ -0.24
CDC42-202ENST00000344548 ACOT9Q9Y305 439 aa13.58□□□□□ -0.24
CDC42-202ENST00000344548 RRP15Q9Y3B9 282 aaKnown RBP13.58□□□□□ -0.24
CDC42-202ENST00000344548 ZNF711Q9Y462 761 aa13.58□□□□□ -0.24
CDC42-202ENST00000344548 C2orf81A6NN90 581 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 SOBPA7XYQ1 873 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 OR1I1O60431 355 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 POU2F2P09086 479 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 DLDP09622 509 aaKnown RBP13.57□□□□□ -0.24
CDC42-202ENST00000344548 CISD3P0C7P0 127 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 KITP10721 976 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 TCF3P15923 654 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 HNF1BP35680 557 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 CCR10P46092 362 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 CCNHP51946 323 aaPredicted RBP13.57□□□□□ -0.24
CDC42-202ENST00000344548 XIAPP98170 497 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 ECT2LQ008S8 904 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 SLC12A1Q13621 1099 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 GAB4Q2WGN9 574 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 MYLK3Q32MK0 819 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 SETMARQ53H47 684 aaPredicted RBP13.57□□□□□ -0.24
CDC42-202ENST00000344548 SYCE2Q6PIF2 218 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 GET4Q7L5D6 327 aaPredicted RBP13.57□□□□□ -0.24
CDC42-202ENST00000344548 TRPM8Q7Z2W7 1104 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 KIAA0907Q7Z7F0 614 aaPredicted RBP13.57□□□□□ -0.24
CDC42-202ENST00000344548 OR6Y1Q8NGX8 325 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 HEXDCQ8WVB3 486 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 GRAMD1AQ96CP6 724 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 MRGPRX3Q96LB0 322 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 IGSF5Q9NSI5 407 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 MARK1Q9P0L2 795 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 GALPQ9UBC7 116 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 RIMKLBQ9ULI2 386 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 VWA7Q9Y334 891 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 A0A0J9YYE9 177 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 TTC34A8MYJ7 566 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 GAPDHSO14556 408 aaPredicted RBP13.57□□□□□ -0.24
CDC42-202ENST00000344548 WISP3O95389 354 aaPredicted RBP13.57□□□□□ -0.24
CDC42-202ENST00000344548 PAPLNO95428 1278 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 CLDN7O95471 211 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 TRBC1P01850 177 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 MC4RP32245 332 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 HADHAP40939 763 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 SLC6A11P48066 632 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 STC1P52823 247 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 POU4F1Q01851 419 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 SLC20A2Q08357 652 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 HYAL1Q12794 435 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 CSHL1Q14406 222 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 TYSND1Q2T9J0 566 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 ELMSAN1Q6PJG2 1045 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 ANKS4BQ8N8V4 417 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 SGF29Q96ES7 293 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 SFXN1Q9H9B4 322 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 DPP7Q9UHL4 492 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 FBXO10Q9UK96 956 aa13.57□□□□□ -0.24
CDC42-202ENST00000344548 NUP210Q8TEM1 1887 aaPredicted RBP13.56□□□□□ -0.24
CDC42-202ENST00000344548 A0A0G2JND7 137 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 NEMP2A6NFY4 417 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 NPIPB15A6NHN6 443 aaPredicted RBP13.56□□□□□ -0.24
CDC42-202ENST00000344548 IGSF6O95976 241 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 GSTA1P08263 222 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 FCARP24071 287 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 GRIA4P48058 902 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 KCNC1P48547 511 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 CSNK1DP48730 415 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 STX3Q13277 289 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 CCDC153Q494R4 210 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 RFLNAQ6ZTI6 216 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 OR2A12Q8NGT7 310 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 TTC8Q8TAM2 541 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 OSCP1Q8WVF1 389 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 PRR11Q96HE9 360 aaPredicted RBP13.56□□□□□ -0.24
CDC42-202ENST00000344548 SORT1Q99523 831 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 KLHL14Q9P2G3 628 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 XPR1Q9UBH6 696 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 DOCK8Q8NF50 2099 aa13.56□□□□□ -0.24
CDC42-202ENST00000344548 STX7O15400 261 aaKnown RBP13.56□□□□□ -0.24
CDC42-202ENST00000344548 UBOX5O94941 541 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms