RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 SLC5A2P31639 672 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 PHBP35232 272 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 HOXD13P35453 343 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 ETV3P41162 512 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 GPR3P46089 330 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 KIAA1024LP59773 190 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 HSPA14Q0VDF9 509 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 ZCCHC8Q6NZY4 707 aaKnown RBP7.37□□□□□ -1.23
ZNF540-202ENST00000343599 FAM35AQ86V20 835 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 OSTM1Q86WC4 334 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 ERI1Q8IV48 349 aaKnown RBP7.37□□□□□ -1.23
ZNF540-202ENST00000343599 ALLCQ8N6M5 410 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 SVIPQ8NHG7 77 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 ERP27Q96DN0 273 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 SGF29Q96ES7 293 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 MIPEPQ99797 713 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 SAP130Q9H0E3 1048 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 SAR1AQ9NR31 198 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 TM7SF3Q9NS93 570 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 GIN1Q9NXP7 522 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 NDRG2Q9UN36 371 aaKnown RBP7.37□□□□□ -1.23
ZNF540-202ENST00000343599 TLR6Q9Y2C9 796 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 PCDHGB3Q9Y5G1 929 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 CCDC187A0A096LP49 1063 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 TULP3O75386 442 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 ARSAP15289 507 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 PCSK6P29122 969 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 ADSSP30520 456 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 PPARGP37231 505 aaPredicted RBP7.37□□□□□ -1.23
ZNF540-202ENST00000343599 KIF11P52732 1056 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 CDC16Q13042 620 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 SHBQ15464 509 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 HNRNPA1L2Q32P51 320 aaKnown RBP7.37□□□□□ -1.23
ZNF540-202ENST00000343599 DCDC5Q6ZRR9 648 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 SETD3Q86TU7 594 aaPredicted RBP7.37□□□□□ -1.23
ZNF540-202ENST00000343599 CPSF7Q8N684 471 aaKnown RBP7.37□□□□□ -1.23
ZNF540-202ENST00000343599 TMEM145Q8NBT3 493 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 LRRC37BQ96QE4 947 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 ERP44Q9BS26 406 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 CADM1Q9BY67 442 aaKnown RBP7.37□□□□□ -1.23
ZNF540-202ENST00000343599 B3GNT5Q9BYG0 378 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 TWSG1Q9GZX9 223 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 ASCL3Q9NQ33 180 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 GID8Q9NWU2 228 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 MKL2Q9ULH7 1088 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 NAALADL1Q9UQQ1 740 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.37□□□□□ -1.23
ZNF540-202ENST00000343599 IGLV3-10A0A075B6K4 115 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 PFDN6O15212 129 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 CILPO75339 1184 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 TFAP2AP05549 437 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 BCKDHBP21953 392 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 IL4RP24394 825 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 HMOX2P30519 316 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 ARRB1P49407 418 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-202ENST00000343599 EIF2B2P49770 351 aaKnown RBP7.36□□□□□ -1.23
ZNF540-202ENST00000343599 XIAPP98170 497 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 IL17AQ16552 155 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 SGO2Q562F6 1265 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 BRMS1LQ5PSV4 323 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 TMTC4Q5T4D3 741 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 UGT2A3Q6UWM9 527 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 Q6ZS52 159 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 PCGF5Q86SE9 256 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 PDSS2Q86YH6 399 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 KLHL7Q8IXQ5 586 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 ZFP28Q8NHY6 868 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 ACTRT1Q8TDG2 376 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 HDAC11Q96DB2 347 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 HPDLQ96IR7 371 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 SNX25Q9H3E2 840 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 ZNF304Q9HCX3 659 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 THSD1Q9NS62 852 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 RBAKQ9NYW8 714 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-202ENST00000343599 HS3ST2Q9Y278 367 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 BAZ2BQ9UIF8 2168 aaKnown RBP7.36□□□□□ -1.23
ZNF540-202ENST00000343599 RGSL1A5PLK6 1076 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 WIPF3A6NGB9 483 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 GOLGA8CPA6NN73 597 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 F8W8V4 182 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 RXRAP19793 462 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 EEF1GP26641 437 aaKnown RBP7.36□□□□□ -1.23
ZNF540-202ENST00000343599 GNL1P36915 607 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-202ENST00000343599 UBA7P41226 1012 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 RABIFP47224 123 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 CHN2P52757 468 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 SEPT6Q14141 434 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 TMEM52BQ4KMG9 183 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 EARS2Q5JPH6 523 aaKnown RBP7.36□□□□□ -1.23
ZNF540-202ENST00000343599 IRF2BP1Q8IU81 584 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 METTL25Q8N6Q8 603 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 ANKRD52Q8NB46 1076 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 XXYLT1Q8NBI6 393 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 STMN2Q93045 179 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 PRR11Q96HE9 360 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-202ENST00000343599 EPSTI1Q96J88 318 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 MAGEB18Q96M61 343 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 INSM2Q96T92 566 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-202ENST00000343599 EBF3Q9H4W6 596 aa7.36□□□□□ -1.23
ZNF540-202ENST00000343599 SLITRK6Q9H5Y7 841 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms