RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 CTSKP43235 329 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 AFF3P51826 1226 aaKnown RBP6.17□□□□□ -1.42
VCAN-203ENST00000343200 TAS2R41P59536 307 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 MTMR1Q13613 665 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 ZNF829Q3KNS6 432 aaPredicted RBP6.17□□□□□ -1.42
VCAN-203ENST00000343200 ZNF790Q6PG37 636 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 URGCPQ8TCY9 931 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 DNAJC1Q96KC8 554 aaKnown RBP6.17□□□□□ -1.42
VCAN-203ENST00000343200 ALDH8A1Q9H2A2 487 aaPredicted RBP6.17□□□□□ -1.42
VCAN-203ENST00000343200 ARMC1Q9NVT9 282 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 PACSIN3Q9UKS6 424 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 CNOT11Q9UKZ1 510 aaKnown RBP6.17□□□□□ -1.42
VCAN-203ENST00000343200 CA5BQ9Y2D0 317 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 SLC30A1Q9Y6M5 507 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 PREX1Q8TCU6 1659 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 TSC2P49815 1807 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 TEX51A0A1B0GUA7 166 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 HSPA12AO43301 675 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 RNASEH1O60930 286 aaKnown RBP6.17□□□□□ -1.42
VCAN-203ENST00000343200 MAP3K6O95382 1288 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 ANGPTL1O95841 491 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 HMGCRP04035 888 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 MAGP20916 626 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 RPL22P35268 128 aaKnown RBP6.17□□□□□ -1.42
VCAN-203ENST00000343200 TMBIM6P55061 237 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 SPESP1Q6UW49 350 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 GCNT7Q6ZNI0 430 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 ZNF621Q6ZSS3 439 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 SLC16A9Q7RTY1 509 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 SLC22A16Q86VW1 577 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 ATCAYQ86WG3 371 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 SDR16C5Q8N3Y7 309 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 RNF148Q8N7C7 305 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 FBXO30Q8TB52 745 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 UFD1Q92890 307 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 TEFMQ96QE5 360 aaKnown RBP6.17□□□□□ -1.42
VCAN-203ENST00000343200 STRBPQ96SI9 672 aaKnown RBP6.17□□□□□ -1.42
VCAN-203ENST00000343200 HTATIP2Q9BUP3 242 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 BTBD2Q9BX70 525 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 C2orf40Q9H1Z8 148 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 PRMT8Q9NR22 394 aaPredicted RBP6.17□□□□□ -1.42
VCAN-203ENST00000343200 TMEM9Q9P0T7 183 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 ARHGEF5Q12774 1597 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 LRRC7Q96NW7 1537 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 ATP10BO94823 1461 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 A0A075B6Q4 140 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 E9PAM4 449 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 J3QR89 54 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 SPTLC1O15269 473 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 SGCEO43556 437 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 CST8O60676 142 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 ZNF35P13682 527 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 SLC6A4P31645 630 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 TXNRD1Q16881 649 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 ISLR2Q6UXK2 745 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 LINGO2Q7L985 606 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 DNAJB7Q7Z6W7 309 aaPredicted RBP6.17□□□□□ -1.42
VCAN-203ENST00000343200 FBXO39Q8N4B4 442 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 SEC14L1Q92503 715 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 MED30Q96HR3 178 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 MRPL57Q9BQC6 102 aaKnown RBP6.17□□□□□ -1.42
VCAN-203ENST00000343200 TRPV4Q9HBA0 871 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 CYP4F12Q9HCS2 524 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 CRLS1Q9UJA2 301 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 PDE10AQ9Y233 779 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 RUVBL1Q9Y265 456 aaKnown RBP6.17□□□□□ -1.42
VCAN-203ENST00000343200 PTPRKQ15262 1439 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 ATE1O95260 518 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 CCNDBP1O95273 360 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 CYP21A2P08686 494 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 PPIL2Q13356 520 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 RBM48Q5RL73 367 aaKnown RBP6.17□□□□□ -1.42
VCAN-203ENST00000343200 TSPAN33Q86UF1 283 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 KCNMB4Q86W47 210 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 TOP1MTQ969P6 601 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 FCRL4Q96PJ5 515 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 C3orf14Q9HBI5 128 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 COPZ2Q9P299 210 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 GNG8Q9UK08 70 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 LRFN2Q9ULH4 789 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 AP4E1Q9UPM8 1137 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 PXDNLA1KZ92 1463 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 EFCAB7A8K855 629 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 PDCD5O14737 125 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 NDUFS2O75306 463 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 RGS9O75916 674 aaPredicted RBP6.17□□□□□ -1.42
VCAN-203ENST00000343200 TSPAN15O95858 294 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 TXNL4AP83876 142 aaKnown RBP6.17□□□□□ -1.42
VCAN-203ENST00000343200 FAM189A2Q15884 450 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 KRBOX4Q5JUW0 171 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 FAM198BQ6UWH4 519 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 RNF44Q7L0R7 432 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 ADGRD2Q7Z7M1 963 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 SLC4A11Q8NBS3 891 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 SLC37A3Q8NCC5 494 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 PPP3R2Q96LZ3 170 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 OR5B12Q96R08 314 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 ZNF446Q9NWS9 450 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 LYARQ9NX58 379 aaKnown RBP6.17□□□□□ -1.42
VCAN-203ENST00000343200 DNAJB4Q9UDY4 337 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms