RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 PWP1Q13610 501 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 SYT12Q8IV01 421 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 ADHFE1Q8IWW8 467 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 SLC7A6OSQ96CW6 309 aaPredicted RBP7.2□□□□□ -1.26
VCAN-202ENST00000342785 DNAJC1Q96KC8 554 aaKnown RBP7.2□□□□□ -1.26
VCAN-202ENST00000342785 GPR21Q99679 349 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 EPS8L2Q9H6S3 715 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 VRTNQ9H8Y1 702 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 OXSMQ9NWU1 459 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 FADS3Q9Y5Q0 445 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 RGS5O15539 181 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 DUSP11O75319 330 aaKnown RBP7.2□□□□□ -1.26
VCAN-202ENST00000342785 CATP04040 527 aaKnown RBP7.2□□□□□ -1.26
VCAN-202ENST00000342785 CTPS1P17812 591 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 AQP4P55087 323 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 PABPC1LQ4VXU2 614 aaKnown RBP7.2□□□□□ -1.26
VCAN-202ENST00000342785 ZNF618Q5T7W0 954 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 TXNDC11Q6PKC3 985 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 ABRAXAS1Q6UWZ7 409 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 ZBTB46Q86UZ6 589 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 PHTF2Q8N3S3 785 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 PSMG2Q969U7 264 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 PPM1MQ96MI6 270 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 YME1L1Q96TA2 773 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 BBS2Q9BXC9 721 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 RHOBTB2Q9BYZ6 727 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 HAPLN2Q9GZV7 340 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 PPM1HQ9ULR3 514 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 SNAP91O60641 907 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 IFNA14P01570 189 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 ABCB1P08183 1280 aaPredicted RBP7.2□□□□□ -1.26
VCAN-202ENST00000342785 SLC1A2P43004 574 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 ATP1A4Q13733 1029 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 ARHGAP36Q6ZRI8 547 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 SLC24A5Q71RS6 500 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 CTU1Q7Z7A3 348 aaKnown RBP7.2□□□□□ -1.26
VCAN-202ENST00000342785 TMEM132CQ8N3T6 1108 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 CPSF7Q8N684 471 aaKnown RBP7.2□□□□□ -1.26
VCAN-202ENST00000342785 OR7D4Q8NG98 312 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 ZNF570Q96NI8 536 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 CLK4Q9HAZ1 481 aaKnown RBP7.2□□□□□ -1.26
VCAN-202ENST00000342785 DYRK1BQ9Y463 629 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 MFHAS1Q9Y4C4 1052 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 CNOT3O75175 753 aaKnown RBP7.19□□□□□ -1.26
VCAN-202ENST00000342785 CLDN11O75508 207 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 GRK4P32298 578 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 CCNHP51946 323 aaPredicted RBP7.19□□□□□ -1.26
VCAN-202ENST00000342785 PITX1P78337 314 aaPredicted RBP7.19□□□□□ -1.26
VCAN-202ENST00000342785 CLDN10P78369 228 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 LCP2Q13094 533 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 DGCR6Q14129 220 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 ACAP2Q15057 778 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 PPP1R15BQ5SWA1 713 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 ANO7Q6IWH7 933 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 CNSTQ6PJW8 725 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 FAM228AQ86W67 206 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 OSTM1Q86WC4 334 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 TRIM69Q86WT6 500 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 KIAA2013Q8IYS2 634 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 ZMAT2Q96NC0 199 aaKnown RBP7.19□□□□□ -1.26
VCAN-202ENST00000342785 SPATA16Q9BXB7 569 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 TEKT2Q9UIF3 430 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 C3orf18Q9UK00 162 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 ZMYND8Q9ULU4 1186 aaPredicted RBP7.19□□□□□ -1.26
VCAN-202ENST00000342785 TPRKBQ9Y3C4 175 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 PCDHGC4Q9Y5F7 938 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 BBIP1A8MTZ0 92 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 KCNH1O95259 989 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 HSMCR30P0CW71 290 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 MAPK8P45983 427 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 HCAR3P49019 387 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 GSCP56915 257 aaPredicted RBP7.19□□□□□ -1.26
VCAN-202ENST00000342785 PARP15Q460N3 678 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 KCTD21Q4G0X4 260 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 SPPL2CQ8IUH8 684 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 OR6K2Q8NGY2 324 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 ESAMQ96AP7 390 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 MTFMTQ96DP5 389 aaKnown RBP7.19□□□□□ -1.26
VCAN-202ENST00000342785 CICQ96RK0 1608 aaPredicted RBP7.19□□□□□ -1.26
VCAN-202ENST00000342785 GLTPD2A6NH11 291 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 MAP3K13O43283 966 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 DLX3O60479 287 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 RAB6CQ53S08 254 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 SPRYD7Q5W111 196 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 C10orf71Q711Q0 1435 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 TWIST2Q8WVJ9 160 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 BRI3BPQ8WY22 251 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 MED8Q96G25 268 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 HBEGFQ99075 208 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 COPS8Q99627 209 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 RAB6CQ9H0N0 254 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 HMX1Q9NP08 348 aaPredicted RBP7.19□□□□□ -1.26
VCAN-202ENST00000342785 GDAP2Q9NXN4 497 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 AP3M1Q9Y2T2 418 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 ASGR1P07306 291 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 ANXA6P08133 673 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 XRCC1P18887 633 aaPredicted RBP7.19□□□□□ -1.26
VCAN-202ENST00000342785 CHI3L1P36222 383 aaPredicted RBP7.19□□□□□ -1.26
VCAN-202ENST00000342785 THOP1P52888 689 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 C21orf59P57076 290 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms