RNA–Protein interactions for RNA: ENST00000342579.7

BPTF-204, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene BPTF, Length 4,041 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-204ENST00000342579 PRAMEF11O60813 436 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 PIGNO95427 931 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 MT-CO1P00395 513 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 CISD3P0C7P0 127 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 NEFHP12036 1026 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 ZNF30P17039 623 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 PTPN3P26045 913 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 YPEL5P62699 121 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 CKAP4Q07065 602 aaKnown RBP4.22□□□□□ -1.73
BPTF-204ENST00000342579 GRIK2Q13002 908 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 ZNF211Q13398 564 aaPredicted RBP4.22□□□□□ -1.73
BPTF-204ENST00000342579 NR0B2Q15466 257 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 KIF19Q2TAC6 998 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 PLBD1Q6P4A8 553 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 C4orf22Q6V702 233 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 CEP128Q6ZU80 1094 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 CHST15Q7LFX5 561 aaPredicted RBP4.22□□□□□ -1.73
BPTF-204ENST00000342579 LCA5Q86VQ0 697 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 TSEN2Q8NCE0 465 aaKnown RBP4.22□□□□□ -1.73
BPTF-204ENST00000342579 HTR3CQ8WXA8 447 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 VPS50Q96JG6 964 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 DHRS1Q96LJ7 313 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 DEPDC7Q96QD5 511 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 GFM1Q96RP9 751 aaKnown RBP4.22□□□□□ -1.73
BPTF-204ENST00000342579 ZSWIM1Q9BR11 485 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 FICDQ9BVA6 458 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 TRIM54Q9BYV2 358 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 TRABDQ9H4I3 376 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 FANCEQ9HB96 536 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 OSGEPQ9NPF4 335 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 SOHLH2Q9NX45 425 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.22□□□□□ -1.735e-7■■■■□ 19.6
BPTF-204ENST00000342579 KLHL3Q9UH77 587 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 AMACRQ9UHK6 382 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 PCDHB3Q9Y5E6 796 aa4.22□□□□□ -1.73
BPTF-204ENST00000342579 MYO18AQ92614 2054 aaKnown RBP4.22□□□□□ -1.73
BPTF-204ENST00000342579 A0A0B4J203 849 aa4.21□□□□□ -1.73
BPTF-204ENST00000342579 PATE3B3GLJ2 98 aa4.21□□□□□ -1.73
BPTF-204ENST00000342579 QSOX1O00391 747 aa4.21□□□□□ -1.73
BPTF-204ENST00000342579 MATN3O15232 486 aa4.21□□□□□ -1.73
BPTF-204ENST00000342579 SOCS5O75159 536 aa4.21□□□□□ -1.73
BPTF-204ENST00000342579 RECQL5O94762 991 aaPredicted RBP4.21□□□□□ -1.73
BPTF-204ENST00000342579 SLC35G4P0C7Q5 338 aa4.21□□□□□ -1.73
BPTF-204ENST00000342579 TSHRP16473 764 aa4.21□□□□□ -1.73
BPTF-204ENST00000342579 MAP4P27816 1152 aaKnown RBP4.21□□□□□ -1.73
BPTF-204ENST00000342579 GKP32189 559 aa4.21□□□□□ -1.73
BPTF-204ENST00000342579 PGFP49763 221 aa4.21□□□□□ -1.73
BPTF-204ENST00000342579 LIG3P49916 1009 aa4.21□□□□□ -1.73
BPTF-204ENST00000342579 TMPRSS15P98073 1019 aa4.21□□□□□ -1.73
BPTF-204ENST00000342579 MAP7D1Q3KQU3 841 aa4.21□□□□□ -1.73
BPTF-204ENST00000342579 FIP1L1Q6UN15 594 aaKnown RBP4.21□□□□□ -1.73
BPTF-204ENST00000342579 ADIPOR2Q86V24 386 aa4.21□□□□□ -1.73
BPTF-204ENST00000342579 TAX1BP1Q86VP1 789 aa4.21□□□□□ -1.73
BPTF-204ENST00000342579 ARL14Q8N4G2 192 aa4.21□□□□□ -1.73
BPTF-204ENST00000342579 TBC1D19Q8N5T2 526 aa4.21□□□□□ -1.73
BPTF-204ENST00000342579 IL22RA1Q8N6P7 574 aa4.21□□□□□ -1.73
BPTF-204ENST00000342579 Q8N9G6 341 aaPredicted RBP4.21□□□□□ -1.73
BPTF-204ENST00000342579 HEXDCQ8WVB3 486 aa4.21□□□□□ -1.73
BPTF-204ENST00000342579 CAPZA3Q96KX2 299 aa4.21□□□□□ -1.73
BPTF-204ENST00000342579 RUNDC3BQ96NL0 473 aa4.21□□□□□ -1.73
BPTF-204ENST00000342579 DNAJC7Q99615 494 aa4.21□□□□□ -1.73
BPTF-204ENST00000342579 CCDC86Q9H6F5 360 aaKnown RBP4.21□□□□□ -1.73
BPTF-204ENST00000342579 MAP10Q9P2G4 905 aa4.21□□□□□ -1.73
BPTF-204ENST00000342579 TRIM10Q9UDY6 481 aa4.21□□□□□ -1.73
BPTF-204ENST00000342579 AJAP1Q9UKB5 411 aaPredicted RBP4.21□□□□□ -1.73
BPTF-204ENST00000342579 SLC39A10Q9ULF5 831 aa4.21□□□□□ -1.73
BPTF-204ENST00000342579 CLEC4EQ9ULY5 219 aa4.21□□□□□ -1.73
BPTF-204ENST00000342579 RRP15Q9Y3B9 282 aaKnown RBP4.21□□□□□ -1.73
BPTF-204ENST00000342579 HS3ST3A1Q9Y663 406 aa4.21□□□□□ -1.73
BPTF-204ENST00000342579 J3KR12 359 aa4.21□□□□□ -1.74
BPTF-204ENST00000342579 ENC1O14682 589 aa4.21□□□□□ -1.74
BPTF-204ENST00000342579 TNFSF14O43557 240 aa4.21□□□□□ -1.74
BPTF-204ENST00000342579 URI1O94763 535 aaPredicted RBP4.21□□□□□ -1.74
BPTF-204ENST00000342579 RPN2P04844 631 aa4.21□□□□□ -1.74
BPTF-204ENST00000342579 CEACAM1P13688 526 aa4.21□□□□□ -1.74
BPTF-204ENST00000342579 TCP1P17987 556 aaKnown RBP4.21□□□□□ -1.74
BPTF-204ENST00000342579 HLA-DPA1P20036 260 aa4.21□□□□□ -1.74
BPTF-204ENST00000342579 FDFT1P37268 417 aa4.21□□□□□ -1.74
BPTF-204ENST00000342579 MAPK10P53779 464 aa4.21□□□□□ -1.74
BPTF-204ENST00000342579 ADPRHP54922 357 aa4.21□□□□□ -1.74
BPTF-204ENST00000342579 CLDN2P57739 230 aa4.21□□□□□ -1.74
BPTF-204ENST00000342579 SLC14A1Q13336 389 aa4.21□□□□□ -1.74
BPTF-204ENST00000342579 MTM1Q13496 603 aa4.21□□□□□ -1.74
BPTF-204ENST00000342579 SEPT7Q16181 437 aaKnown RBP4.21□□□□□ -1.74
BPTF-204ENST00000342579 DPYSL2Q16555 572 aa4.21□□□□□ -1.74
BPTF-204ENST00000342579 SLC30A9Q6PML9 568 aa4.21□□□□□ -1.74
BPTF-204ENST00000342579 CRTC3Q6UUV7 619 aa4.21□□□□□ -1.74
BPTF-204ENST00000342579 LSMEM2Q8N112 164 aa4.21□□□□□ -1.74
BPTF-204ENST00000342579 BBOF1Q8ND07 529 aa4.21□□□□□ -1.74
BPTF-204ENST00000342579 DENND6BQ8NEG7 585 aa4.21□□□□□ -1.74
BPTF-204ENST00000342579 CFAP61Q8NHU2 1237 aa4.21□□□□□ -1.74
BPTF-204ENST00000342579 BRSK1Q8TDC3 778 aa4.21□□□□□ -1.74
BPTF-204ENST00000342579 JPH3Q8WXH2 748 aaPredicted RBP4.21□□□□□ -1.74
BPTF-204ENST00000342579 RAPGEF5Q92565 580 aa4.21□□□□□ -1.74
BPTF-204ENST00000342579 CDKL2Q92772 493 aa4.21□□□□□ -1.74
BPTF-204ENST00000342579 TMEM159Q96B96 161 aa4.21□□□□□ -1.74
BPTF-204ENST00000342579 VPS39Q96JC1 886 aa4.21□□□□□ -1.74
BPTF-204ENST00000342579 PBKQ96KB5 322 aa4.21□□□□□ -1.74
BPTF-204ENST00000342579 ZFRQ96KR1 1074 aaKnown RBP4.21□□□□□ -1.74
BPTF-204ENST00000342579 PRICKLE1Q96MT3 831 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms