RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 SCN9AQ15858 1988 aa13.54□□□□□ -0.24
TMEM248-201ENST00000341567 FKTNO75072 461 aa13.54□□□□□ -0.24
TMEM248-201ENST00000341567 ATP5BP06576 529 aaKnown RBP13.54□□□□□ -0.24
TMEM248-201ENST00000341567 SELPP16109 830 aa13.54□□□□□ -0.24
TMEM248-201ENST00000341567 CKMT2P17540 419 aa13.54□□□□□ -0.24
TMEM248-201ENST00000341567 CORO1AP31146 461 aaKnown RBP13.54□□□□□ -0.24
TMEM248-201ENST00000341567 KCNQ1P51787 676 aa13.54□□□□□ -0.24
TMEM248-201ENST00000341567 PFKPQ01813 784 aa13.54□□□□□ -0.24
TMEM248-201ENST00000341567 DPYSL2Q16555 572 aa13.54□□□□□ -0.24
TMEM248-201ENST00000341567 TTLL9Q3SXZ7 439 aa13.54□□□□□ -0.24
TMEM248-201ENST00000341567 SFT2D3Q587I9 215 aa13.54□□□□□ -0.24
TMEM248-201ENST00000341567 PPM1LQ5SGD2 360 aa13.54□□□□□ -0.24
TMEM248-201ENST00000341567 FAM126BQ8IXS8 530 aa13.54□□□□□ -0.24
TMEM248-201ENST00000341567 LPGAT1Q92604 370 aa13.54□□□□□ -0.24
TMEM248-201ENST00000341567 HGH1Q9BTY7 390 aa13.54□□□□□ -0.24
TMEM248-201ENST00000341567 PCDHAC1Q9H158 963 aa13.54□□□□□ -0.24
TMEM248-201ENST00000341567 CCSER2Q9H7U1 834 aa13.54□□□□□ -0.24
TMEM248-201ENST00000341567 CAPN10Q9HC96 672 aa13.54□□□□□ -0.24
TMEM248-201ENST00000341567 SLC25A13Q9UJS0 675 aa13.54□□□□□ -0.24
TMEM248-201ENST00000341567 ANKRD36CQ5JPF3 1778 aa13.54□□□□□ -0.24
TMEM248-201ENST00000341567 TYROBPO43914 113 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 HS6ST1O60243 411 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 ATP6V1G1O75348 118 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 PWP1Q13610 501 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 FRG1Q14331 258 aaKnown RBP13.53□□□□□ -0.24
TMEM248-201ENST00000341567 ARHGAP36Q6ZRI8 547 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 GPRIN1Q7Z2K8 1008 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 RD3Q7Z3Z2 195 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 OFCC1Q8IZS5 231 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 PTPN18Q99952 460 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 TXLNGYQ9BZA5 131 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 TNKS2Q9H2K2 1166 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 ZFP14Q9HCL3 533 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 SPAG4Q9NPE6 437 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 AGO1Q9UL18 857 aaKnown RBP13.53□□□□□ -0.24
TMEM248-201ENST00000341567 SMCHD1A6NHR9 2005 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 IQCF5A8MTL0 148 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 AP2A1O95782 977 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 STAU1O95793 577 aaKnown RBP13.53□□□□□ -0.24
TMEM248-201ENST00000341567 MAGP20916 626 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 DMPKQ09013 629 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 LPIN1Q14693 890 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 PTPRCAPQ14761 206 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 TLDC1Q6P9B6 456 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 FRMD7Q6ZUT3 714 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 HORMAD1Q86X24 394 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 ARL14EPQ8N8R7 260 aaPredicted RBP13.53□□□□□ -0.24
TMEM248-201ENST00000341567 MYOCQ99972 504 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 MTIF3Q9H2K0 278 aaKnown RBP13.53□□□□□ -0.24
TMEM248-201ENST00000341567 RBMX2Q9Y388 322 aaKnown RBP13.53□□□□□ -0.24
TMEM248-201ENST00000341567 PSAT1Q9Y617 370 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 NAV1Q8NEY1 1877 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 CPSF4O95639 269 aaKnown RBP13.53□□□□□ -0.24
TMEM248-201ENST00000341567 IVDP26440 423 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 KPNA1P52294 538 aaPredicted RBP13.53□□□□□ -0.24
TMEM248-201ENST00000341567 CDH15P55291 814 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 IRF9Q00978 393 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 SLC10A7Q0GE19 358 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 NR1D2Q14995 579 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 CARTPTQ16568 116 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 LSM12Q3MHD2 195 aaKnown RBP13.53□□□□□ -0.24
TMEM248-201ENST00000341567 LDLRAD1Q5T700 205 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 TMCO2Q7Z6W1 182 aaPredicted RBP13.53□□□□□ -0.24
TMEM248-201ENST00000341567 TAGAPQ8N103 731 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 BDH2Q9BUT1 245 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 VWA7Q9Y334 891 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 IGKV6D-21A0A0A0MT36 114 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 PCDH8O95206 1070 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 ABCB1P08183 1280 aaPredicted RBP13.53□□□□□ -0.24
TMEM248-201ENST00000341567 XRCC1P18887 633 aaPredicted RBP13.53□□□□□ -0.24
TMEM248-201ENST00000341567 HLA-DPA1P20036 260 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 SOAT1P35610 550 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 NADK2Q4G0N4 442 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 LIPMQ5VYY2 423 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 PLPP4Q5VZY2 271 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 CLEC6AQ6EIG7 209 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 PKN3Q6P5Z2 889 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 RTKNQ9BST9 563 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 C9orf16Q9BUW7 83 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 FLRT1Q9NZU1 646 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 EVLQ9UI08 416 aaPredicted RBP13.53□□□□□ -0.24
TMEM248-201ENST00000341567 DMTF1Q9Y222 760 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 TIMM22Q9Y584 194 aa13.53□□□□□ -0.24
TMEM248-201ENST00000341567 J3KR12 359 aa13.52□□□□□ -0.24
TMEM248-201ENST00000341567 DLDP09622 509 aaKnown RBP13.52□□□□□ -0.24
TMEM248-201ENST00000341567 LTA4HP09960 611 aaKnown RBP13.52□□□□□ -0.24
TMEM248-201ENST00000341567 WARSP23381 471 aaKnown RBP13.52□□□□□ -0.24
TMEM248-201ENST00000341567 CCNG1P51959 295 aa13.52□□□□□ -0.24
TMEM248-201ENST00000341567 TAS2R39P59534 338 aa13.52□□□□□ -0.24
TMEM248-201ENST00000341567 KLF1Q13351 362 aaPredicted RBP13.52□□□□□ -0.24
TMEM248-201ENST00000341567 SIX1Q15475 284 aaPredicted RBP13.52□□□□□ -0.24
TMEM248-201ENST00000341567 IL27RAQ6UWB1 636 aa13.52□□□□□ -0.24
TMEM248-201ENST00000341567 AGMOQ6ZNB7 445 aa13.52□□□□□ -0.24
TMEM248-201ENST00000341567 RPS27LQ71UM5 84 aaKnown RBP13.52□□□□□ -0.24
TMEM248-201ENST00000341567 LRTOMTQ8WZ04 291 aa13.52□□□□□ -0.24
TMEM248-201ENST00000341567 OTULINQ96BN8 352 aa13.52□□□□□ -0.24
TMEM248-201ENST00000341567 ELOVL6Q9H5J4 265 aa13.52□□□□□ -0.24
TMEM248-201ENST00000341567 SLC13A4Q9UKG4 626 aa13.52□□□□□ -0.24
TMEM248-201ENST00000341567 PRPF19Q9UMS4 504 aaKnown RBP13.52□□□□□ -0.24
TMEM248-201ENST00000341567 AXIN1O15169 862 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms