RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 KELP23276 732 aa16.38■□□□□ 0.21
NECTIN1-202ENST00000340882 PNCKQ6P2M8 343 aa16.38■□□□□ 0.21
NECTIN1-202ENST00000340882 HSCBQ8IWL3 235 aa16.38■□□□□ 0.21
NECTIN1-202ENST00000340882 PYROXD2Q8N2H3 581 aa16.38■□□□□ 0.21
NECTIN1-202ENST00000340882 TMEM35BQ8NCS4 154 aa16.38■□□□□ 0.21
NECTIN1-202ENST00000340882 CASKIN2Q8WXE0 1202 aa16.38■□□□□ 0.21
NECTIN1-202ENST00000340882 NSMCE3Q96MG7 304 aa16.38■□□□□ 0.21
NECTIN1-202ENST00000340882 WDR26Q9H7D7 661 aa16.38■□□□□ 0.21
NECTIN1-202ENST00000340882 METTL5Q9NRN9 209 aaKnown RBP16.38■□□□□ 0.21
NECTIN1-202ENST00000340882 PDP2Q9P2J9 529 aa16.38■□□□□ 0.21
NECTIN1-202ENST00000340882 DNAJC12Q9UKB3 198 aa16.38■□□□□ 0.21
NECTIN1-202ENST00000340882 GNPDA1P46926 289 aa16.37■□□□□ 0.21
NECTIN1-202ENST00000340882 POLD2P49005 469 aa16.37■□□□□ 0.21
NECTIN1-202ENST00000340882 RAB15P59190 212 aa16.37■□□□□ 0.21
NECTIN1-202ENST00000340882 MC2RQ01718 297 aa16.37■□□□□ 0.21
NECTIN1-202ENST00000340882 ABHD18Q0P651 414 aa16.37■□□□□ 0.21
NECTIN1-202ENST00000340882 SEPT6Q14141 434 aa16.37■□□□□ 0.21
NECTIN1-202ENST00000340882 CCDC14Q49A88 953 aa16.37■□□□□ 0.21
NECTIN1-202ENST00000340882 SNAP47Q5SQN1 464 aa16.37■□□□□ 0.21
NECTIN1-202ENST00000340882 TAF3Q5VWG9 929 aa16.37■□□□□ 0.21
NECTIN1-202ENST00000340882 TCTN3Q6NUS6 607 aa16.37■□□□□ 0.21
NECTIN1-202ENST00000340882 TMEM71Q6P5X7 295 aa16.37■□□□□ 0.21
NECTIN1-202ENST00000340882 GBP6Q6ZN66 633 aa16.37■□□□□ 0.21
NECTIN1-202ENST00000340882 ASB18Q6ZVZ8 466 aa16.37■□□□□ 0.21
NECTIN1-202ENST00000340882 TMEM135Q86UB9 458 aa16.37■□□□□ 0.21
NECTIN1-202ENST00000340882 DNAAF5Q86Y56 855 aa16.37■□□□□ 0.21
NECTIN1-202ENST00000340882 FAM81BQ96LP2 452 aa16.37■□□□□ 0.21
NECTIN1-202ENST00000340882 GSDMCQ9BYG8 508 aa16.37■□□□□ 0.21
NECTIN1-202ENST00000340882 RETREG1Q9H6L5 497 aa16.37■□□□□ 0.21
NECTIN1-202ENST00000340882 PRDM8Q9NQV8 689 aa16.37■□□□□ 0.21
NECTIN1-202ENST00000340882 IGSF5Q9NSI5 407 aa16.37■□□□□ 0.21
NECTIN1-202ENST00000340882 TMEM51Q9NW97 253 aa16.37■□□□□ 0.21
NECTIN1-202ENST00000340882 TMEM184BQ9Y519 407 aaPredicted RBP16.37■□□□□ 0.21
NECTIN1-202ENST00000340882 DOPEY1Q5JWR5 2465 aa16.37■□□□□ 0.21
NECTIN1-202ENST00000340882 BICDL2A1A5D9 508 aa16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 RASA4BC9J798 803 aa16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 RASA4O43374 803 aa16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 VPS4BO75351 444 aa16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 STK17BO94768 372 aa16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 DLGAP3O95886 979 aa16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 ELFN1P0C7U0 828 aa16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 CTBSQ01459 385 aa16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 ILF3Q12906 894 aaKnown RBP eCLIP16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 TSR1Q2NL82 804 aaKnown RBP16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 AFMIDQ63HM1 303 aa16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 DPY19L2P1Q6NXN4 242 aa16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 BRAT1Q6PJG6 821 aa16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 KDELC2Q7Z4H8 507 aa16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 ARHGAP22Q7Z5H3 698 aa16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 CCDC13Q8IYE1 715 aa16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 FAM71AQ8IYT1 594 aa16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 GALNT11Q8NCW6 608 aa16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 JOSD2Q8TAC2 188 aa16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 GPT2Q8TD30 523 aa16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 RXFP2Q8WXD0 754 aa16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 CPA5Q8WXQ8 436 aa16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 ZNF641Q96N77 438 aaPredicted RBP16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 TEFMQ96QE5 360 aaKnown RBP16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 FRMD8Q9BZ67 464 aaPredicted RBP16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 PDFQ9HBH1 243 aa16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 SUFUQ9UMX1 484 aa16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 VPS4AQ9UN37 437 aa16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 SRPK3Q9UPE1 567 aa16.36■□□□□ 0.21
NECTIN1-202ENST00000340882 FBN2P35556 2912 aa16.35■□□□□ 0.21
NECTIN1-202ENST00000340882 TRBV23OR9-2A0A075B6M9 112 aa16.35■□□□□ 0.21
NECTIN1-202ENST00000340882 CFAP69A5D8W1 941 aa16.35■□□□□ 0.21
NECTIN1-202ENST00000340882 J3KR12 359 aa16.35■□□□□ 0.21
NECTIN1-202ENST00000340882 MYCLP1P12525 358 aaPredicted RBP16.35■□□□□ 0.21
NECTIN1-202ENST00000340882 STAT5AP42229 794 aa16.35■□□□□ 0.21
NECTIN1-202ENST00000340882 HDAC4P56524 1084 aa16.35■□□□□ 0.21
NECTIN1-202ENST00000340882 BIRC2Q13490 618 aa16.35■□□□□ 0.21
NECTIN1-202ENST00000340882 EXOC3L4Q17RC7 722 aa16.35■□□□□ 0.21
NECTIN1-202ENST00000340882 CRTC2Q53ET0 693 aaPredicted RBP16.35■□□□□ 0.21
NECTIN1-202ENST00000340882 ARCQ7LC44 396 aa16.35■□□□□ 0.21
NECTIN1-202ENST00000340882 HEATR4Q86WZ0 1026 aa16.35■□□□□ 0.21
NECTIN1-202ENST00000340882 RTL3Q8N8U3 475 aaKnown RBP16.35■□□□□ 0.21
NECTIN1-202ENST00000340882 EFHD1Q9BUP0 239 aa16.35■□□□□ 0.21
NECTIN1-202ENST00000340882 PDCL3Q9H2J4 239 aa16.35■□□□□ 0.21
NECTIN1-202ENST00000340882 TRNAU1APQ9NX07 287 aaKnown RBP16.35■□□□□ 0.21
NECTIN1-202ENST00000340882 TLK1Q9UKI8 766 aa16.35■□□□□ 0.21
NECTIN1-202ENST00000340882 KCTD3Q9Y597 815 aa16.35■□□□□ 0.21
NECTIN1-202ENST00000340882 MKRN2OSH3BPM6 223 aa16.34■□□□□ 0.21
NECTIN1-202ENST00000340882 BIN1O00499 593 aa16.34■□□□□ 0.21
NECTIN1-202ENST00000340882 ZW10O43264 779 aa16.34■□□□□ 0.21
NECTIN1-202ENST00000340882 CYP11B1P15538 503 aa16.34■□□□□ 0.21
NECTIN1-202ENST00000340882 POU3F2P20265 443 aaPredicted RBP16.34■□□□□ 0.21
NECTIN1-202ENST00000340882 DCTP40126 519 aa16.34■□□□□ 0.21
NECTIN1-202ENST00000340882 ADCY8P40145 1251 aa16.34■□□□□ 0.21
NECTIN1-202ENST00000340882 PPP1R2P41236 205 aa16.34■□□□□ 0.21
NECTIN1-202ENST00000340882 MC1RQ01726 317 aa16.34■□□□□ 0.21
NECTIN1-202ENST00000340882 ERV3-1Q14264 604 aa16.34■□□□□ 0.21
NECTIN1-202ENST00000340882 ACOX1Q15067 660 aa16.34■□□□□ 0.21
NECTIN1-202ENST00000340882 CFAP58Q5T655 872 aa16.34■□□□□ 0.21
NECTIN1-202ENST00000340882 CEACAM20Q6UY09 585 aa16.34■□□□□ 0.21
NECTIN1-202ENST00000340882 DPPA4Q7L190 304 aa16.34■□□□□ 0.21
NECTIN1-202ENST00000340882 CREBRFQ8IUR6 639 aa16.34■□□□□ 0.21
NECTIN1-202ENST00000340882 CPT1CQ8TCG5 803 aa16.34■□□□□ 0.21
NECTIN1-202ENST00000340882 ECHDC3Q96DC8 303 aa16.34■□□□□ 0.21
NECTIN1-202ENST00000340882 COQ10AQ96MF6 247 aa16.34■□□□□ 0.21
NECTIN1-202ENST00000340882 TEX101Q9BY14 249 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms