RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 DNAJB13P59910 316 aa7.18□□□□□ -1.26
NUP43-201ENST00000340413 ATP6V0D1P61421 351 aa7.18□□□□□ -1.26
NUP43-201ENST00000340413 NFKB2Q00653 900 aa7.18□□□□□ -1.26
NUP43-201ENST00000340413 FASTKD1Q53R41 847 aaKnown RBP7.18□□□□□ -1.26
NUP43-201ENST00000340413 CHRDL2Q6WN34 429 aa7.18□□□□□ -1.26
NUP43-201ENST00000340413 TPGS1Q6ZTW0 290 aa7.18□□□□□ -1.26
NUP43-201ENST00000340413 STRA8Q7Z7C7 330 aa7.18□□□□□ -1.26
NUP43-201ENST00000340413 TRAM1L1Q8N609 369 aa7.18□□□□□ -1.26
NUP43-201ENST00000340413 PTPRN2Q92932 1015 aa7.18□□□□□ -1.26
NUP43-201ENST00000340413 VPS39Q96JC1 886 aa7.18□□□□□ -1.26
NUP43-201ENST00000340413 TSNARE1Q96NA8 513 aa7.18□□□□□ -1.26
NUP43-201ENST00000340413 OSBPL6Q9BZF3 934 aa7.18□□□□□ -1.26
NUP43-201ENST00000340413 LINC00597Q9H2U6 94 aa7.18□□□□□ -1.26
NUP43-201ENST00000340413 POMKQ9H5K3 350 aa7.18□□□□□ -1.26
NUP43-201ENST00000340413 SYTL2Q9HCH5 934 aa7.18□□□□□ -1.26
NUP43-201ENST00000340413 PPM1HQ9ULR3 514 aa7.18□□□□□ -1.26
NUP43-201ENST00000340413 PLLPQ9Y342 182 aa7.18□□□□□ -1.26
NUP43-201ENST00000340413 CHURC1-FNTBB4DL54 471 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 LOC730098B7Z3J9 87 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 TRIM49D1C9J1S8 452 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 COPEO14579 308 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 STX7O15400 261 aaKnown RBP7.17□□□□□ -1.26
NUP43-201ENST00000340413 CD3EAPO15446 510 aaKnown RBP7.17□□□□□ -1.26
NUP43-201ENST00000340413 KCNJ13O60928 360 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 PRAMEP78395 509 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 XIAPP98170 497 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 GALNT1Q10472 559 aaPredicted RBP7.17□□□□□ -1.26
NUP43-201ENST00000340413 MACC1Q6ZN28 852 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 USP30Q70CQ3 517 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 B4GALNT4Q76KP1 1039 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 C12orf76Q8N812 135 aaPredicted RBP7.17□□□□□ -1.26
NUP43-201ENST00000340413 RHEBL1Q8TAI7 183 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 ING5Q8WYH8 240 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 ASIC4Q96FT7 647 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 PCED1AQ9H1Q7 454 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 RSPH9Q9H1X1 276 aaPredicted RBP7.17□□□□□ -1.26
NUP43-201ENST00000340413 UBE2ZQ9H832 354 aaPredicted RBP7.17□□□□□ -1.26
NUP43-201ENST00000340413 ZFYVE1Q9HBF4 777 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 INTS9Q9NV88 658 aaKnown RBP7.17□□□□□ -1.26
NUP43-201ENST00000340413 FZD4Q9ULV1 537 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 FCF1Q9Y324 198 aaKnown RBP7.17□□□□□ -1.26
NUP43-201ENST00000340413 DNMT3AQ9Y6K1 912 aaPredicted RBP7.17□□□□□ -1.26
NUP43-201ENST00000340413 S1PR4O95977 384 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 ITGALP20701 1170 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 GRK2P25098 689 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 RAB10P61026 200 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 MAXP61244 160 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 TMEM196Q5HYL7 178 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 TRMT10BQ6PF06 316 aaKnown RBP7.17□□□□□ -1.26
NUP43-201ENST00000340413 LRRC34Q8IZ02 419 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 LPCAT1Q8NF37 534 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 PDCD6IPQ8WUM4 868 aaKnown RBP7.17□□□□□ -1.26
NUP43-201ENST00000340413 KCNJ9Q92806 393 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 ASB2Q96Q27 587 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 AARSD1Q9BTE6 412 aaKnown RBP7.17□□□□□ -1.26
NUP43-201ENST00000340413 ZSCAN5AQ9BUG6 496 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 P2RY12Q9H244 342 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 CLDND1Q9NY35 253 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 HAO1Q9UJM8 370 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 DOCK8Q8NF50 2099 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 PLXND1Q9Y4D7 1925 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 TMEM120BA0PK00 339 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 CXorf49A8MYA2 514 aaPredicted RBP7.17□□□□□ -1.26
NUP43-201ENST00000340413 TSPAN6O43657 245 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 BANF1O75531 89 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 IGLV3-19P01714 112 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 RBP1P09455 135 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 C5AR1P21730 350 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 EPHB1P54762 984 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 PLOD1Q02809 727 aaPredicted RBP7.17□□□□□ -1.26
NUP43-201ENST00000340413 CDC16Q13042 620 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 POU6F1Q14863 301 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 TERF2Q15554 542 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 GEN1Q17RS7 908 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 C9orf64Q5T6V5 341 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 ATG16L1Q676U5 607 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 TMEM215Q68D42 235 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 ESRP1Q6NXG1 681 aaKnown RBP7.17□□□□□ -1.26
NUP43-201ENST00000340413 RNF165Q6ZSG1 346 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 NKAPQ8N5F7 415 aaKnown RBP7.17□□□□□ -1.26
NUP43-201ENST00000340413 ANKS4BQ8N8V4 417 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 RMDN1Q96DB5 314 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 P2RY13Q9BPV8 354 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 HINFPQ9BQA5 517 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 SMG9Q9H0W8 520 aaKnown RBP7.17□□□□□ -1.26
NUP43-201ENST00000340413 GGT7Q9UJ14 662 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 CLEC4EQ9ULY5 219 aa7.17□□□□□ -1.26
NUP43-201ENST00000340413 HMX2A2RU54 273 aa7.16□□□□□ -1.26
NUP43-201ENST00000340413 SLC16A5O15375 505 aa7.16□□□□□ -1.26
NUP43-201ENST00000340413 KAT7O95251 611 aa7.16□□□□□ -1.26
NUP43-201ENST00000340413 ARSAP15289 507 aa7.16□□□□□ -1.26
NUP43-201ENST00000340413 MMP12P39900 470 aa7.16□□□□□ -1.26
NUP43-201ENST00000340413 MAP7D1Q3KQU3 841 aa7.16□□□□□ -1.26
NUP43-201ENST00000340413 CTAGE3PQ8IX95 158 aa7.16□□□□□ -1.26
NUP43-201ENST00000340413 KLHDC8AQ8IYD2 350 aa7.16□□□□□ -1.26
NUP43-201ENST00000340413 RBFAQ8N0V3 343 aa7.16□□□□□ -1.26
NUP43-201ENST00000340413 CYP4X1Q8N118 509 aa7.16□□□□□ -1.26
NUP43-201ENST00000340413 MDGA1Q8NFP4 955 aa7.16□□□□□ -1.26
NUP43-201ENST00000340413 LPGAT1Q92604 370 aa7.16□□□□□ -1.26
NUP43-201ENST00000340413 MFSD3Q96ES6 412 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms