RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 LINC00032P0C843 101 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 VARSP26640 1264 aaKnown RBP12.85□□□□□ -0.35
USP47-202ENST00000339865 AHSA2Q719I0 299 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 CD101Q93033 1021 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 CPB2Q96IY4 423 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 MCCC2Q9HCC0 563 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 MTMR10Q9NXD2 777 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 A0A0G2JLW4 131 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 SRRM3A6NNA2 597 aaPredicted RBP12.85□□□□□ -0.35
USP47-202ENST00000339865 PRLRP16471 622 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 HMGCS2P54868 508 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 PRKG2Q13237 762 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 GRAPQ13588 217 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 BAATQ14032 418 aaPredicted RBP12.85□□□□□ -0.35
USP47-202ENST00000339865 GRK1Q15835 563 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 USP41Q3LFD5 358 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 ZFP28Q8NHY6 868 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 GRAPLQ8TC17 118 aaPredicted RBP12.85□□□□□ -0.35
USP47-202ENST00000339865 C1QTNF7Q9BXJ2 289 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 TNPO3Q9Y5L0 923 aaKnown RBP12.85□□□□□ -0.35
USP47-202ENST00000339865 RPTORQ8N122 1335 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.85□□□□□ -0.35
USP47-202ENST00000339865 H3BNH8 94 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 SNRPFP62306 86 aaKnown RBP12.85□□□□□ -0.35
USP47-202ENST00000339865 LPCAT4Q643R3 524 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 SLC30A6Q6NXT4 461 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 DSELQ8IZU8 1212 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 STOML3Q8TAV4 291 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 TCF12Q99081 682 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 OMDQ99983 421 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 BTRCQ9Y297 605 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 PER1O15534 1290 aaPredicted RBP12.85□□□□□ -0.35
USP47-202ENST00000339865 RBM34P42696 430 aaKnown RBP12.85□□□□□ -0.35
USP47-202ENST00000339865 RPL38P63173 70 aaKnown RBP12.85□□□□□ -0.35
USP47-202ENST00000339865 EIF5AP63241 154 aaKnown RBP12.85□□□□□ -0.35
USP47-202ENST00000339865 CRADDP78560 199 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 SLC45A4Q5BKX6 768 aa12.85□□□□□ -0.35
USP47-202ENST00000339865 MAPKBP1O60336 1514 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 PRAMEF22A3QJZ6 481 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 UGT2B11O75310 529 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 PRKCHP24723 683 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 ADRA1DP25100 572 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 CASP9P55211 416 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 ADIGQ0VDE8 80 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 GFOD2Q3B7J2 385 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 NPAS2Q99743 824 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 CIB1Q99828 191 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 B3GNT4Q9C0J1 378 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 MAGEE1Q9HCI5 957 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 KCTD5Q9NXV2 234 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 MOCS1Q9NZB8 636 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 PCDH10Q9P2E7 1040 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 ATP6AP2A0A1C7CYW4 349 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 ZNF705EA8MWA4 302 aaPredicted RBP12.84□□□□□ -0.35
USP47-202ENST00000339865 ATP6AP2O75787 350 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 MLYCDO95822 493 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 LINGO3P0C6S8 592 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 IDNKQ5T6J7 187 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 PRAMEF18Q5VWM3 479 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 EIF5AL1Q6IS14 154 aaKnown RBP12.84□□□□□ -0.35
USP47-202ENST00000339865 CRELD2Q6UXH1 353 aaPredicted RBP12.84□□□□□ -0.35
USP47-202ENST00000339865 SSX6Q7RTT6 188 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 CIDECQ96AQ7 238 aaPredicted RBP12.84□□□□□ -0.35
USP47-202ENST00000339865 GLT1D1Q96MS3 346 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 FAIM2Q9BWQ8 316 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 FKBP7Q9Y680 259 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 SMAD9O15198 467 aaKnown RBP12.84□□□□□ -0.35
USP47-202ENST00000339865 ABCG1P45844 678 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 OR3A3P47888 321 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 OR3A2P47893 321 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 POLR2LP62875 67 aaKnown RBP12.84□□□□□ -0.35
USP47-202ENST00000339865 MTA1Q13330 715 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 ATAD3CQ5T2N8 411 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 VANGL1Q8TAA9 524 aaPredicted RBP12.84□□□□□ -0.35
USP47-202ENST00000339865 PLAGL2Q9UPG8 496 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 H7C4K7 107 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 DHX15O43143 795 aaKnown RBP12.84□□□□□ -0.35
USP47-202ENST00000339865 GH1P01241 217 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 IGFBP5P24593 272 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 PTPN6P29350 595 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 MAGEA11P43364 429 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 OR2B6P58173 313 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 IRF8Q02556 426 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 TBX2Q13207 712 aaPredicted RBP12.84□□□□□ -0.35
USP47-202ENST00000339865 PAPD7Q5XG87 772 aaKnown RBP12.84□□□□□ -0.35
USP47-202ENST00000339865 TVP23AA6NH52 213 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 RBAK-RBAKDNI3L0D1 243 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 RCAN1P53805 252 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 RBM23Q86U06 439 aaKnown RBP12.84□□□□□ -0.35
USP47-202ENST00000339865 LNX2Q8N448 690 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 RABL2AQ9UBK7 228 aaPredicted RBP12.84□□□□□ -0.35
USP47-202ENST00000339865 FAM205CA6NFA0 338 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 RGS8P57771 180 aaPredicted RBP12.84□□□□□ -0.35
USP47-202ENST00000339865 PITPNAQ00169 270 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 CHAF1BQ13112 559 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 C2orf76Q3KRA6 126 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 ZNF782Q6ZMW2 699 aaPredicted RBP12.84□□□□□ -0.35
USP47-202ENST00000339865 ZBTB8BQ8NAP8 495 aaPredicted RBP12.84□□□□□ -0.35
USP47-202ENST00000339865 ADAM32Q8TC27 787 aa12.84□□□□□ -0.35
USP47-202ENST00000339865 COLEC11Q9BWP8 271 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms