RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 INVSQ9Y283 1065 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 SLC9A8Q9Y2E8 581 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 PCDHA8Q9Y5H6 950 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 OAS3Q9Y6K5 1087 aaKnown RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 LTBP3Q9NS15 1303 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 A0A1W2PRG6 482 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 IL1BP01584 269 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 PDGFRAP16234 1089 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 MAGEA8P43361 318 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 CXCL12P48061 93 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 PPP4CP60510 307 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 HTRA3P83110 453 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 FOXK1P85037 733 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 SLC13A2Q13183 592 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 LBRQ14739 615 aaKnown RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 PLA2G4EQ3MJ16 856 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 PRAMEF19Q5SWL8 479 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 RETSATQ6NUM9 610 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 TRIM40Q6P9F5 258 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 C3orf67Q6ZVT6 689 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 USP30Q70CQ3 517 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 LYSMD3Q7Z3D4 306 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 NLRP14Q86W24 1093 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 WDSUB1Q8N9V3 476 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 DAGLBQ8NCG7 672 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 RAB2BQ8WUD1 216 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 MSANTD3Q96H12 275 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 ERMAPQ96PL5 475 aaPredicted RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 SSU72Q9NP77 194 aaKnown RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 PNPLA3Q9NST1 481 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 THAP1Q9NVV9 213 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 TAS2R7Q9NYW3 318 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 ZNF624Q9P2J8 865 aaPredicted RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 KLHL42Q9P2K6 505 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 KCNIP3Q9Y2W7 256 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 NOX1Q9Y5S8 564 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 NPIPA5A0A0B4J1W7 369 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 SOWAHDA6NJG2 315 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 MCIDASD6RGH6 385 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 NUAK1O60285 661 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 KHDRBS3O75525 346 aaKnown RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 SERPINB7O75635 380 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 CYB5AP00167 134 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 IFNGP01579 166 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 PSMA2P25787 234 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 AGTR1P30556 359 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 TCF7P36402 384 aaPredicted RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 EIF2S3P41091 472 aaKnown RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 NAMPTP43490 491 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 PLA2G4AP47712 749 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 ACSM2AQ08AH3 577 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 EIF2S3LQ2VIR3 472 aaKnown RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 FASTKD1Q53R41 847 aaKnown RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 PAN3Q58A45 887 aaKnown RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 TFDP3Q5H9I0 405 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 KCTD16Q68DU8 428 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 CCDC81Q6ZN84 652 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 FBXO16Q8IX29 292 aaPredicted RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 SCAIQ8N9R8 606 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 TOR1AIP2Q8NFQ8 470 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 PTPRN2Q92932 1015 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 RERGQ96A58 199 aaPredicted RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 FAM213AQ9BRX8 229 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 LSM14BQ9BX40 385 aaKnown RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 CALN1Q9BXU9 219 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 OSBPL2Q9H1P3 480 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 NKX2-4Q9H2Z4 354 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 SLC24A3Q9HC58 644 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 ANAPC2Q9UJX6 822 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 TMED5Q9Y3A6 229 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 PEX16Q9Y5Y5 336 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 GREB1LQ9C091 1923 aaPredicted RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 TEX13CA0A0J9YWL9 993 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 SLC33A1O00400 549 aaPredicted RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 ADAMDEC1O15204 470 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 LY86O95711 162 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 GSTT2P0CG29 244 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 ACRP10323 421 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 HNF1AP20823 631 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 GDI1P31150 447 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 NDST1P52848 882 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 PEX3P56589 373 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 MRPS6P82932 125 aaKnown RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 NR1I3Q14994 352 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 HSD17B12Q53GQ0 312 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 BSPRYQ5W0U4 402 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 FAM118BQ9BPY3 351 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 MGME1Q9BQP7 344 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 XKR8Q9H6D3 395 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 CYTH4Q9UIA0 394 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 CDH9Q9ULB4 789 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 KIAA1024Q9UPX6 916 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 E2F8A0AVK6 867 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 TCP11X1B4DZS4 312 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 BTBD19C9JJ37 291 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 PLD2O14939 933 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 YKT6O15498 198 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 NDUFS3O75489 264 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 TDP2O95551 362 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 ASLP04424 464 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms