RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 SETD3Q86TU7 594 aaPredicted RBP16.35■□□□□ 0.21
LITAF-201ENST00000339430 AUTS2Q8WXX7 1259 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 MYEOVQ96EZ4 313 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 SEPT5Q99719 369 aaPredicted RBP16.35■□□□□ 0.21
LITAF-201ENST00000339430 CLSTN3Q9BQT9 956 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 FBXO44Q9H4M3 255 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 ALG9Q9H6U8 611 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 PIDD1Q9HB75 910 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 BACE2Q9Y5Z0 518 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 KIAA1671Q9BY89 1806 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 TRPC5OSA6NMA1 111 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 TXNDC9O14530 226 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 IPO13O94829 963 aaKnown RBP16.35■□□□□ 0.21
LITAF-201ENST00000339430 LINC00271P0C7V0 271 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 PIRTP0C851 137 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 SLC2A3P11169 496 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 ACVRL1P37023 503 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 MAGEA11P43364 429 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 MS4A2Q01362 244 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 DUSP4Q13115 394 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 MGAT5BQ3V5L5 792 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 C10orf120Q5SQS8 335 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 IL31Q6EBC2 164 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 KLC3Q6P597 504 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 CEP70Q8NHQ1 597 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 SPPL2BQ8TCT7 592 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 EXT2Q93063 718 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 FBXO32Q969P5 355 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 C8orf48Q96LL4 319 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 RPRD1AQ96P16 312 aaPredicted RBP16.35■□□□□ 0.21
LITAF-201ENST00000339430 RAD9AQ99638 391 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 VCX3BQ9H321 246 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 EFCAB1Q9HAE3 211 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.35■□□□□ 0.21
LITAF-201ENST00000339430 LCHNA4D1U4 455 aa16.34■□□□□ 0.21
LITAF-201ENST00000339430 TCAF2A6NFQ2 919 aa16.34■□□□□ 0.21
LITAF-201ENST00000339430 TLL1O43897 1013 aa16.34■□□□□ 0.21
LITAF-201ENST00000339430 PPM1AP35813 382 aa16.34■□□□□ 0.21
LITAF-201ENST00000339430 POLD3Q15054 466 aaPredicted RBP16.34■□□□□ 0.21
LITAF-201ENST00000339430 CUZD1Q86UP6 607 aa16.34■□□□□ 0.21
LITAF-201ENST00000339430 PGAM4Q8N0Y7 254 aa16.34■□□□□ 0.21
LITAF-201ENST00000339430 ATP6V0D2Q8N8Y2 350 aa16.34■□□□□ 0.21
LITAF-201ENST00000339430 BHLHE22Q8NFJ8 381 aaPredicted RBP16.34■□□□□ 0.21
LITAF-201ENST00000339430 BLOC1S5Q8TDH9 187 aa16.34■□□□□ 0.21
LITAF-201ENST00000339430 MAELQ96JY0 434 aaKnown RBP16.34■□□□□ 0.21
LITAF-201ENST00000339430 HERC2P3Q9BVR0 1158 aa16.34■□□□□ 0.21
LITAF-201ENST00000339430 VWA7Q9Y334 891 aa16.34■□□□□ 0.21
LITAF-201ENST00000339430 SLC12A8A0AV02 714 aa16.34■□□□□ 0.21
LITAF-201ENST00000339430 FGF18O76093 207 aa16.34■□□□□ 0.21
LITAF-201ENST00000339430 HDCP19113 662 aa16.34■□□□□ 0.21
LITAF-201ENST00000339430 KCNC1P48547 511 aa16.34■□□□□ 0.21
LITAF-201ENST00000339430 GALNT3Q14435 633 aa16.34■□□□□ 0.21
LITAF-201ENST00000339430 CLEC6AQ6EIG7 209 aa16.34■□□□□ 0.21
LITAF-201ENST00000339430 RYBPQ8N488 228 aaPredicted RBP16.34■□□□□ 0.21
LITAF-201ENST00000339430 PCDH20Q8N6Y1 951 aaKnown RBP16.34■□□□□ 0.21
LITAF-201ENST00000339430 ARRDC2Q8TBH0 407 aa16.34■□□□□ 0.21
LITAF-201ENST00000339430 IFT43Q96FT9 208 aa16.34■□□□□ 0.21
LITAF-201ENST00000339430 TBATAQ96M53 351 aa16.34■□□□□ 0.21
LITAF-201ENST00000339430 GCNAQ96QF7 691 aa16.34■□□□□ 0.21
LITAF-201ENST00000339430 RANBP9Q96S59 729 aa16.34■□□□□ 0.21
LITAF-201ENST00000339430 SEMA3CQ99985 751 aa16.34■□□□□ 0.21
LITAF-201ENST00000339430 VPS45Q9NRW7 570 aa16.34■□□□□ 0.21
LITAF-201ENST00000339430 ZDHHC7Q9NXF8 308 aa16.34■□□□□ 0.21
LITAF-201ENST00000339430 MARCH2Q9P0N8 246 aa16.34■□□□□ 0.21
LITAF-201ENST00000339430 ARL5AQ9Y689 179 aa16.34■□□□□ 0.21
LITAF-201ENST00000339430 GREB1Q4ZG55 1949 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 CARNS1A5YM72 827 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 MROH6A6NGR9 719 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 CAPN8A6NHC0 703 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 SLC22A2O15244 555 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 RAMP2O60895 175 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 URODP06132 367 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 ATXN1LP0C7T5 689 aaKnown RBP16.33■□□□□ 0.2
LITAF-201ENST00000339430 UQCRBP14927 111 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 YWHAQP27348 245 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 ALDH1A3P47895 512 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 SMARCB1Q12824 385 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 TAF10Q12962 218 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 MED21Q13503 144 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 RASIP1Q5U651 963 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 PQLC1Q8N2U9 271 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 OR52K2Q8NGK3 314 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 TSPAN17Q96FV3 270 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 ABHD8Q96I13 439 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 BTN2A3PQ96KV6 586 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 UBXN10Q96LJ8 280 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 PSMD13Q9UNM6 376 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 ASB3Q9Y575 518 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 ACTL7AQ9Y615 435 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 ATP6AP2A0A1C7CYW4 349 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 MUSKO15146 869 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 LDB2O43679 373 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 ATP6AP2O75787 350 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 S1PR4O95977 384 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 ADSLP30566 484 aaPredicted RBP16.33■□□□□ 0.2
LITAF-201ENST00000339430 OR1E1P30953 314 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 HERC3Q15034 1050 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 CFAP52Q8N1V2 620 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 PELI3Q8N2H9 469 aa16.33■□□□□ 0.2
LITAF-201ENST00000339430 KLHL23Q8NBE8 558 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms